DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pad and Sp2

DIOPT Version :9

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_084496.2 Gene:Sp2 / 78912 MGIID:1926162 Length:613 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..87 CDD:214871
C2H2 Zn finger 710..730 CDD:275368
zf-C2H2 736..760 CDD:278523
C2H2 Zn finger 738..760 CDD:275368
zf-H2C2_2 752..777 CDD:290200
zf-C2H2 766..788 CDD:278523
C2H2 Zn finger 768..788 CDD:275368
zf-H2C2_2 780..808 CDD:290200
C2H2 Zn finger 799..819 CDD:275368
Sp2NP_084496.2 zf-C2H2 525..549 CDD:278523
C2H2 Zn finger 530..549 CDD:275368
zf-H2C2_2 542..568 CDD:290200
C2H2 Zn finger 557..579 CDD:275368
zf-H2C2_2 571..594 CDD:290200
zf-C2H2 585..607 CDD:278523
C2H2 Zn finger 587..607 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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