DRSC/TRiP Functional Genomics Resources

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Protein Alignment pad and sp3

DIOPT Version :9

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_002934651.1 Gene:sp3 / 733736 XenbaseID:XB-GENE-977158 Length:750 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..87 CDD:214871
C2H2 Zn finger 710..730 CDD:275368
zf-C2H2 736..760 CDD:278523
C2H2 Zn finger 738..760 CDD:275368
zf-H2C2_2 752..777 CDD:290200
zf-C2H2 766..788 CDD:278523
C2H2 Zn finger 768..788 CDD:275368
zf-H2C2_2 780..808 CDD:290200
C2H2 Zn finger 799..819 CDD:275368
sp3XP_002934651.1 C2H2 Zn finger 593..615 CDD:275368
zf-H2C2_2 607..634 CDD:372612
C2H2 Zn finger 623..645 CDD:275368
zf-H2C2_2 637..660 CDD:372612
zf-C2H2 651..673 CDD:333835
C2H2 Zn finger 653..673 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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