DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pad and SP4

DIOPT Version :10

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_003103.2 Gene:SP4 / 6671 HGNCID:11209 Length:784 Species:Homo sapiens


Alignment Length:819 Identity:187/819 - (22%)
Similarity:293/819 - (35%) Gaps:225/819 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 QQQYTITMDNGVQQQQQQHQAMPEVQIKSERQTALE----EFIRLKPDIKITPLGKKEPISPAKP 207
            |||..|....|:.|.|.|.|.:..|      .|.|.    :.:...|     |..|:..:|  :|
Human    69 QQQIIIDPSQGLVQLQNQPQQLELV------TTQLAGNAWQLVASTP-----PASKENNVS--QP 120

  Fly   208 QQQHSLQSQTVTPTINPTQ--------------LQLQPQLGD---QLQPLWQQIQQLQLQ----- 250
            ....|..|.:...:.:||:              :|:|...|.   |:.|..|.::..|:|     
Human   121 ASSSSSSSSSNNGSASPTKTKSGNSSTPGQFQVIQVQNPSGSVQYQVIPQLQTVEGQQIQINPTS 185

  Fly   251 -QQLQQLTNQLQ----ATTQYSVAQDDTSSSGDSKKPKLNFVLSSPTAPQFTTSMPQFGGSQPQI 310
             ..||.|..|:|    ...|..:...:.::||:        :|:...|.|......:.|.|.| :
Human   186 SSSLQDLQGQIQLISAGNNQAILTAANRTASGN--------ILAQNLANQTVPVQIRPGVSIP-L 241

  Fly   311 QLQLMPGS------------GGVTSA-------------------------GT--------VPAQ 330
            |||.:||:            ||||.|                         ||        .|..
Human   242 QLQTLPGTQAQVVTTLPINIGGVTLALPVINNVAAGGGTGQVGQPAATADSGTSNGNQLVSTPTN 306

  Fly   331 TQLNAAALLSSLAGPQSTTNLLSPNKCFLPITIRDENSDQQIVAHIDTKNLVLPTTYQVQMKLQ- 394
            |..:|:.:..|   |.|:|...:.....|       .|...:|:..||......:....:..:: 
Human   307 TTTSASTMPES---PSSSTTCTTTASTSL-------TSSDTLVSSADTGQYASTSASSSERTIEE 361

  Fly   395 ---PQLATADGQPIMQLTPTSI------PATLQLTPQTLGNPGSAFQGTTVTQNQFLAPQQPLTQ 450
               |....::.|...||.|..:      ..:||.. |.:|.|       .:.|.|...|||.:.|
Human   362 SQTPAATESEAQSSSQLQPNGMQNAQDQSNSLQQV-QIVGQP-------ILQQIQIQQPQQQIIQ 418

  Fly   451 L--PNTAQVTSQQIIRSPHTSTTNSQLVIRNVTNIPPTPTTPTSSKKAPTFKTPSPKQKPMPSPK 513
            .  |.:.|:.|.|.|:      |..|..::||......||....  :|||. |||          
Human   419 AIPPQSFQLQSGQTIQ------TIQQQPLQNVQLQAVNPTQVLI--RAPTL-TPS---------- 464

  Fly   514 SKTTVGPSSGGSNGTSTNEFKRLITQTKPQPQVKQQQTAGLSASGAPTATSANQAAMQRLSSNTT 578
                      |.....|.:.:.:  |:....||   |.||||.....|..|:        |..||
Human   465 ----------GQISWQTVQVQNI--QSLSNLQV---QNAGLSQQLTITPVSS--------SGGTT 506

  Fly   579 ITKV-PKQPASLPAPAPTSNPAKLPMLNKQNITISRISMQTAPKAQSKPSTTSPTPASQ------ 636
            :.:: |...|..|....|:..|.:|  |.|.::::.:. ....:.|..|.|.:.....|      
Human   507 LAQIAPVAVAGAPITLNTAQLASVP--NLQTVSVANLG-AAGVQVQGVPVTITSVAGQQQGQDGV 568

  Fly   637 --------PIPVSVPALSQA-----QPPPLAAQHKKIVRKPPENQDTSGQKVKAARPPQQILPS- 687
                    |:.|:|..::.|     .|..|...|.:      :.|.||.|:|:..:..:::..| 
Human   569 KVQQATIAPVTVAVGGIANATIGAVSPDQLTQVHLQ------QGQQTSDQEVQPGKRLRRVACSC 627

  Fly   688 ---PQQEGQNATHSGSEAPTTSGLIC--PTCKREFKKKEHLTQHVKLHAGLRPFKCSEEGCDKTF 747
               .:.||:.:...|.:...    ||  ..|.:.:.|..||..|::.|.|.|||.|:...|.|.|
Human   628 PNCREGEGRGSNEPGKKKQH----ICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRF 688

  Fly   748 SRKEHLSRHLVSHSGQKMYTCEVCKKPFSRKDNLNKHRRIHTQTSTETLYCCDVCNKNFATKLHY 812
            :|.:.|.||..:|:|:|.:.|..|.|.|.|.|:|:||.:.|..            .|...|.|..
Human   689 TRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQN------------KKGGGTALAI 741

  Fly   813 EKHREMHKKIRPESAAPG----ATASPAAAPALTHVRSN 847
            ....|:...:.....:|.    |..|..:.||..:|.:|
Human   742 VTSGELDSSVTEVLGSPRIVTVAAISQDSNPATPNVSTN 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..88 CDD:462262
PHA03247 <497..709 CDD:223021 48/235 (20%)
C2H2 Zn finger 710..730 CDD:275368 6/21 (29%)
zf-C2H2 736..760 CDD:395048 9/23 (39%)
C2H2 Zn finger 738..760 CDD:275368 8/21 (38%)
zf-C2H2 766..788 CDD:395048 9/21 (43%)
C2H2 Zn finger 768..788 CDD:275368 9/19 (47%)
zf-C2H2 797..819 CDD:395048 4/21 (19%)
C2H2 Zn finger 799..819 CDD:275368 4/19 (21%)
SP4NP_003103.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68
SP4_N 32..648 CDD:411773 143/673 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..150 9/47 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..390 19/118 (16%)
9aaTAD, inactive. /evidence=ECO:0000269|PubMed:31375868 467..475 1/7 (14%)
zf-C2H2 647..671 CDD:395048 7/27 (26%)
C2H2 Zn finger 649..671 CDD:275368 6/21 (29%)
zf-C2H2 677..701 CDD:395048 9/23 (39%)
C2H2 Zn finger 679..701 CDD:275368 8/21 (38%)
zf-H2C2_2 693..716 CDD:463886 9/22 (41%)
zf-C2H2 707..729 CDD:395048 9/21 (43%)
C2H2 Zn finger 709..729 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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