DRSC/TRiP Functional Genomics Resources

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Protein Alignment pad and ZKSCAN2

DIOPT Version :9

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001012999.3 Gene:ZKSCAN2 / 342357 HGNCID:25677 Length:967 Species:Homo sapiens


Alignment Length:883 Identity:160/883 - (18%)
Similarity:285/883 - (32%) Gaps:299/883 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PEVQIKSE--RQTALEEFIRLKPDIKITPLGKKEPISPAKPQQQHSLQSQTVTPTINPTQLQLQP 231
            ||::.|.:  ....:|:|:.:.|: ||....:|:  .|...::..:|.......|....|....|
Human    76 PEMRSKEQILELLVIEQFLTILPE-KIQAWAQKQ--CPQSGEEAVALVVHLEKETGRLRQQVSSP 137

  Fly   232 QLGDQLQPL---WQ--QIQQLQLQQQLQQLTNQLQATTQYSVAQDDTSSSGDSKKPKLNFVLSSP 291
            ...::..||   |:  ..|..|::.|.:.::.: :..:.:|..|:..:...: ::|.......||
Human   138 VHREKHSPLGAAWEVADFQPEQVETQPRAVSRE-EPGSLHSGHQEQLNRKRE-RRPLPKNARPSP 200

  Fly   292 TAPQF------------TTSMPQFGGSQPQIQLQLMPGSGGVTSAGTVPAQTQL-------NAAA 337
            ..|..            ||.:|. |..:|...:.:..|.....|...:|||..|       |...
Human   201 WVPALADEWNTLDQEVTTTRLPA-GSQEPVKDVHVARGFSYRKSVHQIPAQRDLYRDFRKENVGN 264

  Fly   338 LLSSLAGPQSTTNLLSPNKCFLPITIRDENSDQQIVAHIDTKNLVLPTTYQVQMKLQPQLATADG 402
            :: ||....||:|.::        .:........:..|...|..:|.:.|..:..:.        
Human   265 VV-SLGSAVSTSNKIT--------RLEQRKEPWTLGLHSSNKRSILRSNYVKEKSVH-------- 312

  Fly   403 QPIMQLTPTSIPATLQ------LTPQTLGNPGSAFQGT-----TVTQNQFLAPQQPLTQLPNTAQ 456
              .:|:...|...|.:      |..:.:.....:::.|     .:.:::|   .:.|...|..:|
Human   313 --AIQVPARSAGKTWREQQQWGLEDEKIAGVHWSYEETKTFLAILKESRF---YETLQACPRNSQ 372

  Fly   457 V---------------TSQQIIRSPHTSTTNSQLVIRNVTNIPPTP--------TTPTSSKKAPT 498
            |               |.:| .|:...|...|...:||...:.|..        ..|.:  :||:
Human   373 VYGAVAEWLRECGFLRTPEQ-CRTKFKSLQKSYRKVRNGHMLEPCAFFEDMDALLNPAA--RAPS 434

  Fly   499 FKTPSPKQKPMPSPKSKTTVGPSSGGSNGTSTNEFKRLITQTKPQPQVKQQQTAGLSAS------ 557
              |..||:. :|.|:                   .||:....|....:.:::.|...:.      
Human   435 --TDKPKEM-IPVPR-------------------LKRIAISAKEHISLVEEEEAAEDSDDDEIGI 477

  Fly   558 ---------GAP---------------TAT-----------SANQAAMQRLSSNTTIT------- 580
                     |||               |.|           .|.||..::......:.       
Human   478 EFIRKSEIHGAPVLFQNLSGVHWGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRECG 542

  Fly   581 --KVPKQ------------------------------------PASLPAPAPTSNPAKLPMLNKQ 607
              :.|:|                                    .||.|:|   |.|.::|..::|
Human   543 FLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDALINSRASAPSP---STPEEVPSPSRQ 604

  Fly   608 NITISRISMQTAPKAQSKPSTTSPTPASQPIPVS---VPALSQAQ---------PPPL------- 653
                .|..::..|:   :|:...|...||...:.   ...:|:.:         ||.|       
Human   605 ----ERGGIEVEPQ---EPTGWEPEETSQEAVIEDSCSERMSEEEIVQEPEFQGPPGLLQSPNDF 662

  Fly   654 -----------------AAQHKKIVRKPPE--NQDT-----------SG------QKVKAARPPQ 682
                             ..||:.::.|...  :|.|           ||      |.::..:|..
Human   663 EIGSSIKEDPTQIVYKDMEQHRALIEKSKRVVSQSTDPSKYRKRECISGRQWENLQGIRQGKPMS 727

  Fly   683 QILPSPQQEGQNATHS--------------GSEAPTTSGLI------------CPTCKREFKKKE 721
            |    |:..|:...|.              |.....::.|:            |..|.:.|.:..
Human   728 Q----PRDLGKAVVHQRPFVGKRPYRLLKYGESFGRSTRLMCRMTHHKENPYKCGVCGKCFGRSR 788

  Fly   722 HLTQHVKLHAGLRPFKCSEEGCDKTFSRKEHLSRHLVSHSGQKMYTCEVCKKPFSRKDNLNKHRR 786
            .|.:|.::|.|.:||||.:  |.|:|:...:...|...|:|:|.|.|..|.|.||:..:|..|:|
Human   789 SLIRHQRIHTGEKPFKCLD--CGKSFNDSSNFGAHQRIHTGEKPYRCGECGKCFSQSSSLIIHQR 851

  Fly   787 IHTQTSTETLYCCDVCNKNFATKLHYEKHREMHKKIRP 824
            .||   .|..|.|..|.|:|....|:..||.:|....|
Human   852 THT---GEKPYQCGECGKSFTNSSHFSAHRRVHTGENP 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..87 CDD:214871
C2H2 Zn finger 710..730 CDD:275368 5/19 (26%)
zf-C2H2 736..760 CDD:278523 7/23 (30%)
C2H2 Zn finger 738..760 CDD:275368 5/21 (24%)
zf-H2C2_2 752..777 CDD:290200 9/24 (38%)
zf-C2H2 766..788 CDD:278523 9/21 (43%)
C2H2 Zn finger 768..788 CDD:275368 8/19 (42%)
zf-H2C2_2 780..808 CDD:290200 11/27 (41%)
C2H2 Zn finger 799..819 CDD:275368 7/19 (37%)
ZKSCAN2NP_001012999.3 SCAN 41..148 CDD:128708 16/74 (22%)
SCAN 41..129 CDD:280241 12/55 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..205 10/56 (18%)
KRAB_A-box 227..268 CDD:143639 8/41 (20%)
KRAB <248..289 CDD:214630 10/49 (20%)
Myb_DNA-bind_4 340..421 CDD:290549 14/84 (17%)
Myb_DNA-bind_4 497..578 CDD:290549 7/80 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..626 12/49 (24%)
COG5048 771..>957 CDD:227381 40/121 (33%)
zf-C2H2 775..797 CDD:278523 5/21 (24%)
C2H2 Zn finger 777..797 CDD:275368 5/19 (26%)
zf-H2C2_2 789..813 CDD:290200 10/25 (40%)
zf-C2H2 803..825 CDD:278523 7/23 (30%)
C2H2 Zn finger 805..825 CDD:275368 5/21 (24%)
zf-C2H2 831..853 CDD:278523 9/21 (43%)
C2H2 Zn finger 833..853 CDD:275368 8/19 (42%)
zf-H2C2_2 845..870 CDD:290200 11/27 (41%)
C2H2 Zn finger 861..881 CDD:275368 7/19 (37%)
zf-H2C2_2 873..898 CDD:290200 5/14 (36%)
C2H2 Zn finger 889..909 CDD:275368
zf-H2C2_2 902..925 CDD:290200
C2H2 Zn finger 917..937 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 941..967
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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