DRSC/TRiP Functional Genomics Resources

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Protein Alignment pad and Zscan10

DIOPT Version :9

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001028597.2 Gene:Zscan10 / 332221 MGIID:3040700 Length:782 Species:Mus musculus


Alignment Length:877 Identity:170/877 - (19%)
Similarity:288/877 - (32%) Gaps:266/877 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EGRAK-NLSQKILECLSLQIDEKDRLPKVVCAQCVQLVEQIHGLRATCRNSQ-----TMLNNCLN 92
            |.|.: .::.::..|...|   :|..|:....:..:|..  |.||......:     .:|...|:
Mouse    34 ESRPRPEVAHQLFRCFQYQ---EDMGPRASLGRLRELCN--HWLRPALHTKKQILELLVLEQFLS 93

  Fly    93 IRPAPSSDKLY---IRDAVDETGKSLSVAQSAPPVPNGAQQSGNLLNSIIQAVNMQPQQQYTITM 154
            :.|.....:|:   :||..:       |.|....||......|.|..|.....|....   .|:.
Mouse    94 VLPPHVLSRLHGQPLRDGEE-------VVQLLEGVPRDISHMGPLDFSFSAGKNAPAD---IISE 148

  Fly   155 DNGVQQQQQQHQAMPEVQIKSERQTALEEFIRLKPDIKITPLGKKEPISPAKPQQQHSLQSQTVT 219
            :.....|...|.  |:.::.||...||.....|.|.       :..||.||:|::.....|....
Mouse   149 EQNSPSQVPSHS--PQTELPSEEIPALHPLNELPPP-------QPAPIRPAEPEEWRLAPSSNWP 204

  Fly   220 PTINPTQLQLQPQLGDQLQ-PLWQQIQQLQLQQQLQQLTNQLQATTQYSVAQDDTSSSGDSKKPK 283
            .:..|.::...|:..:..| |.|     |:...:.|:|...|:     |:..:|||.........
Mouse   205 MSPEPQEILQDPRESNPSQGPSW-----LEENSRDQELAAVLE-----SLTFEDTSEKRAWPANP 259

  Fly   284 LNFVLSSPTAPQFTTSMPQFGGSQPQIQLQLMPGSGGVTSAGTVPAQTQLNAAALLSSLAGPQST 348
            |.|                  ||:                   :|...:|       .:..|:.|
Mouse   260 LGF------------------GSR-------------------MPDNEEL-------KVEEPKVT 280

  Fly   349 TNLLSPNKCFLPITIRDENSDQQIVAHIDTKNLVLPTTYQVQMKLQPQLATADGQPIMQLTPTSI 413
            |         .|:.|..|:..:                       :|::|   |:|:.|      
Mouse   281 T---------WPVVIGAESQTE-----------------------KPEVA---GEPLTQ------ 304

  Fly   414 PATLQLTPQTLGNPGSAFQGTTVTQ----NQFLAPQQPL--------TQLPNTAQVTSQQIIRSP 466
              |:.....:.|..|:...|:.|.:    :....||..:        ...|..:.:.:.|:  ..
Mouse   305 --TVGQETSSTGWGGTPADGSEVVKVRGASDAPEPQGEMQFICTYCGVNFPEMSHLQAHQL--QS 365

  Fly   467 HTSTTNSQLVIRNVTNIPPTPTTPTSSKKAPTFKTPSPKQKPMPSPKSKTTVGPSSGGSNGTSTN 531
            |                                    |..:|.||.:|...:.  .|.:.|.|:.
Mouse   366 H------------------------------------PNLQPHPSSRSFRCLW--CGKTFGRSSI 392

  Fly   532 EFKRLITQTKPQPQV------KQQQTAGL-------SASGAPTATSANQAAMQRLS--------- 574
            ....:.|.|..:|..      :.:|::.|       |:..|......||...:|.|         
Mouse   393 LKLHMRTHTDERPHACHLCNRRFRQSSHLTKHLLTHSSEPAFRCAECNQGFQRRSSLMQHLLAHA 457

  Fly   575 --SNTT-----ITKVPKQPASLPAPAPTS------------NPAKLPMLNKQNITISRISMQTAP 620
              .|.|     .||||:..|.|.:....:            |.||    :|.::           
Mouse   458 QGKNLTPNPEGKTKVPEMAAVLCSHCGQTFKRRSSLKRHLRNHAK----DKDHL----------- 507

  Fly   621 KAQSKPSTTSPTPASQPIPVSVPALSQAQPPPLAAQHKKI-VRKPP------------ENQDTSG 672
             :...|.:.|.:..|.|...|....:..|...|....::: .|:.|            .:|..|.
Mouse   508 -SSEDPGSLSSSQESNPYVCSDCGKAFRQSEQLMIHTRRVHTRERPFSCQVCGRCFTQNSQLISH 571

  Fly   673 QKVKAARPPQQILPSPQQEGQNATHSG-SEAPTTSGLI----CPTCKREFKKKEHLTQHVKLHAG 732
            |::.....|.   ..||...:....:| :....|.|.:    |..|.:.|::...||:||:.|.|
Mouse   572 QQIHTGEKPH---ACPQCSKRFVRRAGLARHLLTHGSLRPYHCAQCGKSFRQMRDLTRHVRCHTG 633

  Fly   733 LRPFKCSEEGCDKTFSRKEHLSRHLVSHSGQKMYTCEVCKKPFSRKDNLNKHRRIHTQTSTETLY 797
            .:|.:|:|  |.:.|::..||:||...|:|:|.:.|::|...|....||.:|||.||   .|..|
Mouse   634 EKPCRCNE--CGEGFTQNAHLARHQRIHTGEKPHACDICGHRFRNSSNLARHRRSHT---GERPY 693

  Fly   798 CCDVCNKNFATKLHYEKHREMHKKIRPESAAP 829
            .|..|.::|....|.::|...|...:.|...|
Mouse   694 SCPTCGRSFRRNAHLQRHLITHTGSKQEKEVP 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..87 CDD:214871 10/58 (17%)
C2H2 Zn finger 710..730 CDD:275368 7/19 (37%)
zf-C2H2 736..760 CDD:278523 8/23 (35%)
C2H2 Zn finger 738..760 CDD:275368 8/21 (38%)
zf-H2C2_2 752..777 CDD:290200 10/24 (42%)
zf-C2H2 766..788 CDD:278523 8/21 (38%)
C2H2 Zn finger 768..788 CDD:275368 8/19 (42%)
zf-H2C2_2 780..808 CDD:290200 12/27 (44%)
C2H2 Zn finger 799..819 CDD:275368 5/19 (26%)
Zscan10NP_001028597.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 1/2 (50%)
SCAN 39..123 CDD:153421 17/95 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..233 7/40 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..321 8/64 (13%)
C2H2 Zn finger 345..372 CDD:275368 4/64 (6%)
COG5048 366..767 CDD:227381 91/422 (22%)
C2H2 Zn finger 380..400 CDD:275368 3/21 (14%)
zf-H2C2_2 393..417 CDD:290200 3/23 (13%)
C2H2 Zn finger 408..428 CDD:275368 2/19 (11%)
C2H2 Zn finger 436..456 CDD:275368 4/19 (21%)
C2H2 Zn finger 480..500 CDD:275368 0/19 (0%)
zf-C2H2 480..500 CDD:278523 0/19 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..522 6/46 (13%)
C2H2 Zn finger 526..547 CDD:275368 3/20 (15%)
zf-C2H2 553..575 CDD:278523 3/21 (14%)
C2H2 Zn finger 555..575 CDD:275368 3/19 (16%)
zf-H2C2_2 568..592 CDD:290200 5/26 (19%)
C2H2 Zn finger 583..603 CDD:275368 3/19 (16%)
SIR2 <592..>643 CDD:294129 15/52 (29%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
zf-H2C2_2 623..648 CDD:290200 11/26 (42%)
C2H2 Zn finger 639..659 CDD:275368 8/21 (38%)
zf-H2C2_2 651..676 CDD:290200 10/24 (42%)
C2H2 Zn finger 667..687 CDD:275368 8/19 (42%)
zf-H2C2_2 679..704 CDD:290200 12/27 (44%)
C2H2 Zn finger 695..715 CDD:275368 5/19 (26%)
C2H2 Zn finger 728..748 CDD:275368
zf-C2H2 754..776 CDD:278523
C2H2 Zn finger 756..776 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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