DRSC/TRiP Functional Genomics Resources

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Protein Alignment pad and Egr1

DIOPT Version :9

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_036683.1 Gene:Egr1 / 24330 RGDID:2544 Length:508 Species:Rattus norvegicus


Alignment Length:526 Identity:128/526 - (24%)
Similarity:187/526 - (35%) Gaps:129/526 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 NIPPTPTTPTSSKKAPTF----KTPSPKQKPMPSPKSKTTVGPSSGGSNGTSTNEFKRLITQTKP 542
            |.|........|..||.|    .||........|..|.::.|...||.:.:.::.|       .|
  Rat     3 NYPKLEEMMLLSNGAPQFLGAAGTPEGSGGNNSSSSSSSSSGGGGGGGSNSGSSAF-------NP 60

  Fly   543 QPQVKQQQTAGLSASGAPTATSANQAAMQRLSSNTTITKVPKQPASLP----------APAPTSN 597
            |.:..:|....|:..........|:.|:..       |..|.|...||          .|||.|.
  Rat    61 QGEPSEQPYEHLTTESFSDIALNNEKALVE-------TSYPSQTTRLPPITYTGRFSLEPAPNSG 118

  Fly   598 ----PAKLPMLNKQNITISRISMQTAPKAQSKPSTTSPTPASQPIPVSVPALSQAQPP-----PL 653
                |.  |:.:..:..:|..:..|:..:...|:.:|.:.|||..|:|....|....|     |.
  Rat   119 NTLWPE--PLFSLVSGLVSMTNPPTSSSSAPSPAASSSSSASQSPPLSCAVPSNDSSPIYSAAPT 181

  Fly   654 AAQHKKIVRKPPENQDTSGQKVKAARPPQQILPS---------------PQQEG----------- 692
            .......:...|::|...|....|.:.|....|:               |||:|           
  Rat   182 FPTPNTDIFPEPQSQAFPGSAGTALQYPPPAYPATKGGFQVPMIPDYLFPQQQGDLSLGTPDQKP 246

  Fly   693 ----QNATHSGSEAP--------TTSG--------------LICPTCKREFKKKEHLTQHVKLHA 731
                :|.|...|..|        |.||              ||.|:..|::..:...|...:   
  Rat   247 FQGLENRTQQPSLTPLSTIKAFATQSGSQDLKALNNTYQSQLIKPSRMRKYPNRPSKTPPHE--- 308

  Fly   732 GLRPFKCSEEGCDKTFSRKEHLSRHLVSHSGQKMYTCEVCKKPFSRKDNLNKHRRIHTQTSTETL 796
              ||:.|..|.||:.|||.:.|:||:..|:|||.:.|.:|.:.|||.|:|..|.|.||   .|..
  Rat   309 --RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT---GEKP 368

  Fly   797 YCCDVCNKNFA--------TKLHY-EKHREMHKKIRPESAA--------PGATASPAAA------ 838
            :.||:|.:.||        ||:|. :|.::..|.:...|||        |.||:.|:.|      
  Rat   369 FACDICGRKFARSDERKRHTKIHLRQKDKKADKSVVASSAASSLSSYPSPVATSYPSPATTSFPS 433

  Fly   839 PALTHVRSNGQ----VPNKAVFEIKQERSAQQTQTQQPPAQVMHVVTTQDLAGNTITITQAPDSN 899
            |..|...|.|.    .|..:.|   ...|...|....|||....|.|.|....:....|....|:
  Rat   434 PVPTSYSSPGSSTYPSPAHSGF---PSPSVATTYASVPPAFPAQVSTFQSAGVSNSFSTSTGLSD 495

  Fly   900 MPGSLA 905
            |..:.:
  Rat   496 MTATFS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..87 CDD:214871
C2H2 Zn finger 710..730 CDD:275368 3/19 (16%)
zf-C2H2 736..760 CDD:278523 10/23 (43%)
C2H2 Zn finger 738..760 CDD:275368 10/21 (48%)
zf-H2C2_2 752..777 CDD:290200 10/24 (42%)
zf-C2H2 766..788 CDD:278523 9/21 (43%)
C2H2 Zn finger 768..788 CDD:275368 9/19 (47%)
zf-H2C2_2 780..808 CDD:290200 11/35 (31%)
C2H2 Zn finger 799..819 CDD:275368 9/28 (32%)
Egr1NP_036683.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..78 14/66 (21%)
DUF3446 107..182 CDD:288757 18/76 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..210 15/73 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..311 3/23 (13%)
zf-C2H2 311..335 CDD:278523 10/23 (43%)
C2H2 Zn finger 313..335 CDD:275368 10/21 (48%)
zf-H2C2_2 327..352 CDD:290200 10/24 (42%)
COG5048 338..>396 CDD:227381 22/60 (37%)
C2H2 Zn finger 343..363 CDD:275368 9/19 (47%)
zf-H2C2_2 355..380 CDD:290200 10/27 (37%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..453 18/70 (26%)
7 X 8 AA tandem repeats of [TS](2)-[FY]-[PS]-S-P-[GSAV]-X 413..468 13/57 (23%)
DUF3432 420..495 CDD:288743 19/77 (25%)
BES1_N <424..453 CDD:283367 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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