DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pad and Sp1

DIOPT Version :10

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_038700.2 Gene:Sp1 / 20683 MGIID:98372 Length:781 Species:Mus musculus


Alignment Length:922 Identity:208/922 - (22%)
Similarity:298/922 - (32%) Gaps:302/922 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LRATCRNSQTMLNNCLNIR-PAPSSDKLYIRDAVDETGKSLS--------VAQSAPPVPNGAQQS 131
            |.|||...::...|..|.: |:.|..    ...:|.|...||        ::.|:...|...:||
Mouse    66 LAATCSRIESPNENSNNSQGPSQSGG----TGELDLTAAQLSQGANGWQIISSSSGATPTSKEQS 126

  Fly   132 GNLLNSIIQAVNMQPQ-QQYTITMDNGVQQQQQ-----------QHQAMPEVQIKSERQTALEEF 184
            ||..|....:.|.... .||.:.....:|.||.           |:|.:|:.|....:|      
Mouse   127 GNSTNGSESSKNRTVSGGQYVVAATPNLQNQQVLTGLPGVMPNIQYQVIPQFQTVDGQQ------ 185

  Fly   185 IRLKPDIKITPLGKKEPISPAKPQQQHSLQSQTVTPTINPTQLQLQPQLGDQLQPLWQQIQQLQL 249
                  ::....|       |:.||..|.|.| :.|..|.   |:.|..|.....:......||.
Mouse   186 ------LQFAATG-------AQVQQDGSGQIQ-IIPGANQ---QIIPNRGSGGNIIAAMPNLLQQ 233

  Fly   250 QQQLQQLTNQ-LQATTQYSVAQDDTSSSGDSKKPKLNFVLSSPTAPQFTTSMPQFGGSQPQIQLQ 313
            ...||.|.|. |...||| |.....:.:|:.....:|.|.::...|..........|||.     
Mouse   234 AVPLQGLANNVLSGQTQY-VTNVPVALNGNITLLPVNSVSAATLTPSSQAGTISSSGSQE----- 292

  Fly   314 LMPGSGGVTSAGTVPAQTQLNAAALLSSLAGPQS-TTNLLSPNKCFLPITIRDENSDQQIVAHID 377
                    :|:..|.:.|.:::|:|:||.|...| .||                           
Mouse   293 --------SSSQPVTSGTAISSASLVSSQASSSSFFTN--------------------------- 322

  Fly   378 TKNLVLPTTYQVQMKLQPQLATADGQPIMQLTPTSIPATLQ--LTPQTLG--------------N 426
             .|....||            |.....||..|.:....|..  .|||.:|              .
Mouse   323 -ANSYSTTT------------TTSNMGIMNFTSSGSSGTSSQGQTPQRVGGLQGSDSLNIQQNQT 374

  Fly   427 PGSAFQGT----------TVTQNQFLAPQ--------QPLTQLPNTAQVTSQQIIRSPHTSTTNS 473
            .|.:.||:          |..|...:.||        |.|...|.:.|..:.|.|    :..|..
Mouse   375 SGGSLQGSQQKEGEQSQQTQQQQILIQPQLVQGGQALQALQAAPLSGQTFTTQAI----SQETLQ 435

  Fly   474 QLVIRNVTNIPPTPTTPTSSKKAPTFKTPSPKQKPMPSPKSKTTVGPSSGGSNGTSTNEFKRLIT 538
            .|.::.|.|..|.           ..:||              ||||:  |.....|.:.:.|  
Mouse   436 NLQLQAVQNSGPI-----------IIRTP--------------TVGPN--GQVSWQTLQLQNL-- 471

  Fly   539 QTKPQPQVKQQQTAGLSASGAP-TATSANQAAMQRLSSNTTITKVPKQPASLPAPAPTSNPAKL- 601
                |.|..|.||..|    || ...|..|.:    |||||:|.: ...||:||...|.|.|:| 
Mouse   472 ----QVQNPQAQTITL----APMQGVSLGQTS----SSNTTLTPI-ASAASIPAGTVTVNAAQLS 523

  Fly   602 PMLNKQNITISRISMQTAPKAQSKPSTTSPTPASQPIPVSVPALSQAQPPPLAAQHKKIVRKPPE 666
            .|...|.|.:|.:.             ||.....|     :|.|      |||     |...|.:
Mouse   524 SMPGLQTINLSALG-------------TSGIQVHQ-----LPGL------PLA-----IANTPGD 559

  Fly   667 NQDTSGQKVKAARPPQQILPSPQQEGQNATHSGSEAPTTSGL-------------ICPTCKRE-- 716
            :....|            |.....:|.:...:|.|...:|.|             .||.||..  
Mouse   560 HGTQLG------------LHGSGGDGIHDETAGGEGENSSDLQPQAGRRTRREACTCPYCKDSEG 612

  Fly   717 ------FKKKEHLTQHVKLHAGLRPFKCSEEGCDKTFSRKEHLSRHLVSHSGQKMYTC--EVCKK 773
                  .|||:|:              |..:||.|.:.:..||..||..|:|::.:.|  ..|.|
Mouse   613 RASGDPGKKKQHI--------------CHIQGCGKVYGKTSHLRAHLRWHTGERPFMCNWSYCGK 663

  Fly   774 PFSRKDNLNKHRRIHTQTSTETLYCCDVCNKNFATKLHYEKHREMHKKIRPESAAPGATASPAAA 838
            .|:|.|.|.:|:|.||   .|..:.|..|.|.|....|..||.:.|:.   :...||...|....
Mouse   664 RFTRSDELQRHKRTHT---GEKKFACPECPKRFMRSDHLSKHIKTHQN---KKGGPGVALSVGTL 722

  Fly   839 PALTHVRSNGQVPNKAVFEIKQERSAQQTQTQQPPAQV------MHVVTTQDLAG------NTIT 891
            |..:...|.|                    |..|.|.:      |..:..:.:|.      |.:.
Mouse   723 PLDSGAGSEG--------------------TATPSALITTNMVAMEAICPEGIARLANSGINVMQ 767

  Fly   892 ITQAPDSNMPGS 903
            :|:....|:.|:
Mouse   768 VTELQSINISGN 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..88 CDD:462262 4/11 (36%)
PHA03247 <497..709 CDD:223021 54/226 (24%)
C2H2 Zn finger 710..730 CDD:275368 8/27 (30%)
zf-C2H2 736..760 CDD:395048 8/23 (35%)
C2H2 Zn finger 738..760 CDD:275368 8/21 (38%)
zf-C2H2 766..788 CDD:395048 9/23 (39%)
C2H2 Zn finger 768..788 CDD:275368 9/21 (43%)
zf-C2H2 797..819 CDD:395048 7/21 (33%)
C2H2 Zn finger 799..819 CDD:275368 7/19 (37%)
Sp1NP_038700.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 8/32 (25%)
Repressor domain. /evidence=ECO:0000250 2..84 6/17 (35%)
SP1_N 56..625 CDD:411775 162/726 (22%)
Transactivation domain A (Gln-rich). /evidence=ECO:0000250 145..250 29/127 (23%)
Transactivation domain B (Gln-rich). /evidence=ECO:0000250 260..494 66/327 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..300 5/33 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..395 14/76 (18%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:P08047 461..469 1/7 (14%)
Transactivation domain C (highly charged). /evidence=ECO:0000250 495..608 37/158 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..595 7/43 (16%)
VZV IE62-binding. /evidence=ECO:0000250 617..781 49/203 (24%)
zf-C2H2 624..648 CDD:395048 9/37 (24%)
C2H2 Zn finger 626..648 CDD:275368 8/21 (38%)
zf-H2C2_2 640..667 CDD:463886 10/26 (38%)
C2H2 Zn finger 656..678 CDD:275368 9/21 (43%)
zf-H2C2_2 670..693 CDD:463886 9/25 (36%)
zf-C2H2 684..706 CDD:395048 7/21 (33%)
C2H2 Zn finger 686..706 CDD:275368 7/19 (37%)
Domain D. /evidence=ECO:0000250 706..781 16/97 (16%)

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