DRSC/TRiP Functional Genomics Resources

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Protein Alignment pad and znf276

DIOPT Version :10

Sequence 1:NP_650534.2 Gene:pad / 41981 FlyBaseID:FBgn0038418 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_002933710.1 Gene:znf276 / 100486887 XenbaseID:XB-GENE-983669 Length:570 Species:Xenopus tropicalis


Alignment Length:556 Identity:111/556 - (19%)
Similarity:179/556 - (32%) Gaps:199/556 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 GTTVTQNQFLAPQQPLTQLPNTAQVTSQQIIRSPHTSTTNSQLVIRN-VTNIPPTPTTPTSSKKA 496
            |.:|.|:    |:.|            |.:.:..|......:.|:|. :..:..:||.|..:|  
 Frog    98 GVSVRQD----PELP------------QFVCKHCHAQFYKCRSVLRTFIQKVNTSPTNPHGNK-- 144

  Fly   497 PTFKTPSPKQKPMPSPKSKTTVGPSSGGSNG--TSTNE-FKRLITQTKPQ----------PQVKQ 548
                          |.|....:|.::|....  |||.| ...|:..|...          .:|..
 Frog   145 --------------SDKIHDVIGSTTGPCADLITSTPECLHSLVNWTHKHAGGCSFLPILQRVMA 195

  Fly   549 QQTAGLSASGAPTATSANQAAMQRLSSNTTITKVPKQPASLPA-PAPTSNPAKLPMLNKQNIT-- 610
            .|..|:.           ||..:....:..|.:......|.|| |....:|       :|.::  
 Frog   196 TQYCGII-----------QAVWECGGGHDYIMQPDSDCISSPAQPEEEMSP-------EQGLSGN 242

  Fly   611 -ISRISMQTAPKAQSKPS-------------------TTSPTPASQPIPVSVPALSQAQ------ 649
             |.||:.:|.|.::..|.                   |.:.||:.   |::.|..||.|      
 Frog   243 GIHRINTRTIPDSEYNPPDRINTASVLLDTCVVVNHITQNRTPSP---PLAAPDSSQGQDCRNST 304

  Fly   650 -------------------------------------PPPLAAQHKKIVRKPPENQDTS------ 671
                                                 .|.:|.::.:..|:|.::|..:      
 Frog   305 LASNDHSKEDCSDLSDGDFQSQEEGEPGQQPSSDDSFEPCIAKRNPQKKREPRKSQKLTEFREKK 369

  Fly   672 -------GQKVKAARPPQQILPSPQQEGQNATHSGS---------------EAPTTSGLIC--PT 712
                   .:|:|..|.....:.....:|..|.:.|:               |.|      |  |.
 Frog   370 KPGPKPGWKKIKREREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRERP------CPHPG 428

  Fly   713 CKREFKKKEHLTQHVKL-HAGLRPFKCSEEGCDKTFSRKEHLSRHLVSHSGQKMYTCEV----CK 772
            |.:.|....:|.:|||| |...|...|.:  |.:.|.:::|||.|.:.|||.|...|||    |:
 Frog   429 CNKVFMIDRYLQRHVKLIHTEERNHICDQ--CGQAFKQRKHLSVHQMRHSGAKPLQCEVCGFQCR 491

  Fly   773 KPFSRKDNLNKHRRIHTQTSTETLYCCDVCNKNFATKLHYEKHREMHKKIRPESAAPGATASPAA 837
            :..|.|.::.||:     ...:..:.||.|.|.|....:...|..|   :.|      .|.|||.
 Frog   492 QRASLKYHMTKHK-----AEADLEFACDQCAKRFEKAHNLNVHMSM---VHP------LTQSPAK 542

  Fly   838 APALTHVRSNGQVPNKAVFEIKQERSAQQTQTQQPP 873
            .|.......:|..         :|:..:...|||.|
 Frog   543 QPETEPDAHSGTT---------EEQVLKPELTQQLP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
padNP_650534.2 zf-AD 16..88 CDD:462262
PHA03247 <497..709 CDD:223021 49/318 (15%)
C2H2 Zn finger 710..730 CDD:275368 9/22 (41%)
zf-C2H2 736..760 CDD:395048 7/23 (30%)
C2H2 Zn finger 738..760 CDD:275368 7/21 (33%)
zf-C2H2 766..788 CDD:395048 8/25 (32%)
C2H2 Zn finger 768..788 CDD:275368 8/23 (35%)
zf-C2H2 797..819 CDD:395048 6/21 (29%)
C2H2 Zn finger 799..819 CDD:275368 6/19 (32%)
znf276XP_002933710.1 SFP1 <320..476 CDD:227516 31/163 (19%)
C2H2 Zn finger 427..447 CDD:275368 8/19 (42%)
C2H2 Zn finger 455..475 CDD:275368 7/21 (33%)
C2H2 Zn finger 483..503 CDD:275368 6/19 (32%)
C2H2 Zn finger 513..530 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

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