DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17930 and ITR1

DIOPT Version :10

Sequence 1:NP_650533.1 Gene:CG17930 / 41979 FlyBaseID:FBgn0038416 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:511 Identity:114/511 - (22%)
Similarity:183/511 - (35%) Gaps:152/511 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QQQPPPPPPPTTVIITTQSNSRWATPTQTQSGTAATLLFVYAGMDMAQGLGWNLTAVSANTLEFQ 98
            |.:|......|:|:||.         .|:.|....||.||                  |:...|.
Yeast    62 QIKPVNDEDDTSVMITF---------NQSLSPFIITLTFV------------------ASISGFM 99

  Fly    99 YSWFIGVIIGAVVSAITSAFLPKIVFYG----------LG------------------------G 129
            :.:..|.|..|::| |.:....|::.||          ||                        .
Yeast   100 FGYDTGYISSALIS-IGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSN 163

  Fly   130 VMNLIDAIIFVSAPYEYESILAARYVG-GVGIGLITVPFLIHSAEIASSTNRGTCCALEQYGLAL 193
            :|.:|.||:.|||...::..:....:| |||||.:..|..|  :|||....||....:....|..
Yeast   164 LMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFI--SEIAPKMIRGRLTVINSLWLTG 226

  Fly   194 GVAIQVIYDSQWSQGLGMTINRVHGIFGIVF------TAIALGSVAITIDSPIFYIRQNQEQKAR 252
            |..:        :.|.|..:|.|:..:.|:.      ||:....:....|:|.:|:.:....:|.
Yeast   227 GQLV--------AYGCGAGLNYVNNGWRILVGLSLIPTAVQFTCLCFLPDTPRYYVMKGDLARAT 283

  Fly   253 ASVKQLMGSY--WTREAGDRAYDEAKLYVVEGSAQG--VGEQLGESMMPF------LKLLLFRC- 306
            ..:|:   ||  .:.|..:|..:|  |..:..|..|  |.|::..::...      |:.|:..| 
Yeast   284 EVLKR---SYTDTSEEIIERKVEE--LVTLNQSIPGKNVPEKVWNTIKELHTVPSNLRALIIGCG 343

  Fly   307 ---FVAFTFSVPLSYSILTTTELVEGTLHSWPTIIFGLLRLIGALITFAVLDTVGRKFVSLLGL- 367
               ...||....|.|...|..|.|.....|..:||......|..|:.|..:|.:||:.:.|:|| 
Yeast   344 LQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLP 408

  Fly   368 -MCMAGLMLGMAGVYGDYGHIFDDYFMWQVCRLGMAFQFFAGFFICSSSAYLGEAFPMRVKPFLI 431
             |.||.::..:|..:                 ||:.|.......:.|..:..|            
Yeast   409 GMTMALVVCSIAFHF-----------------LGIKFDGAVAVVVSSGFSSWG------------ 444

  Fly   432 GLIVCLEQVIHIIVIVKFVPTAEFYYTYFVAVGIIMVIGLVAF--AVLMPE-TRGL 484
                       |::||..:..|.||     |:|    ||.|.:  :.|.|: .||:
Yeast   445 -----------IVIIVFIIVFAAFY-----ALG----IGTVPWQQSELFPQNVRGI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17930NP_650533.1 MFS 98..488 CDD:475125 100/447 (22%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 103/472 (22%)

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