DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17930 and ERDL6

DIOPT Version :10

Sequence 1:NP_650533.1 Gene:CG17930 / 41979 FlyBaseID:FBgn0038416 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_177658.1 Gene:ERDL6 / 843859 AraportID:AT1G75220 Length:487 Species:Arabidopsis thaliana


Alignment Length:220 Identity:42/220 - (19%)
Similarity:64/220 - (29%) Gaps:88/220 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SAKHVNASGDRFAVKYMGYAPILQTIRERPIADRDALVRHCINTVVSSRATHEYSVIQHEGVVGP 80
            |.||:|.. ||..|...             |.|...||...:...:|          ::|.:...
plant   240 SLKHLNIF-DRVGVFSF-------------IEDMPKLVEASVRVKLS----------KNEKLPKV 280

  Fly    81 YVSVYQLDLFLNISSFTITCFHIQDGRTHLLGRYKNNQISHYK---YREIDGRHYLGIV------ 136
            ..||..|.|.|    :....||:.|       |:.:.|:.|.|   |........|.::      
plant   281 LTSVEHLSLDL----YPSMVFHLDD-------RFISKQLLHLKLDIYDNFQSNLLLSLLKDLPNL 334

  Fly   137 --MKIGRT------EKRECN---------------------------------VFMLDNDIALND 160
              :|:..:      |.:.|:                                 |::|.|...|.:
plant   335 QSLKLNHSHPSYNVEDQPCSVSEPSSVPECLSFHLETFQWIGYAGTFEEIAAAVYVLKNARCLKN 399

  Fly   161 LTTKLRSVDERRHNNALQLETRLRS 185
            .|..|.|   |...|.|.:...|.|
plant   400 ATISLYS---RGTENGLMMIKELES 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17930NP_650533.1 MFS 98..488 CDD:475125 24/138 (17%)
ERDL6NP_177658.1 MFS_GLUT6_8_Class3_like 49..481 CDD:340916 42/220 (19%)

Return to query results.
Submit another query.