DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17930 and Slc2a4

DIOPT Version :10

Sequence 1:NP_650533.1 Gene:CG17930 / 41979 FlyBaseID:FBgn0038416 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001416984.1 Gene:Slc2a4 / 25139 RGDID:2711 Length:518 Species:Rattus norvegicus


Alignment Length:511 Identity:110/511 - (21%)
Similarity:188/511 - (36%) Gaps:166/511 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PTQTQSGTAATLLFVYAGMDMAQGLGWNLTAVSA--NTLEFQYS--------------------- 100
            |.|..:||  .:|.|::.:..:...|:|:..::|  ..:|..|:                     
  Rat    16 PQQRVTGT--LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLT 78

  Fly   101 --WFIGVIIGAVVSAITSAFLPKIVFYGLGG----VMNLIDAII------FVSAPYEYESILAAR 153
              |.:.|.|.: |..:.|:||..|:...||.    :.|.:.|::      ..:|...||.::..|
  Rat    79 TLWALSVAIFS-VGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEILILGR 142

  Fly   154 YVGGVGIGLIT--VPFLIHSAEIASSTNRGTCCALEQYGLALGVAIQVIYDSQWSQGLGMTINRV 216
            ::.|...||.:  ||..:  .|||.:..||....|.|..:.:|:.:        :|.||:     
  Rat   143 FLIGAYSGLTSGLVPMYV--GEIAPTHLRGALGTLNQLAIVIGILV--------AQVLGL----- 192

  Fly   217 HGIFGIVFTAIALGSVAITI--------------DSPIF-YIRQNQEQKARASVKQLMGSYWTRE 266
            ..:.|.......|  :|||:              :||.: ||.:|.|..||.|:|:|.|.....:
  Rat   193 ESMLGTATLWPLL--LAITVLPALLQLLLLPFCPESPRYLYIIRNLEGPARKSLKRLTGWADVSD 255

  Fly   267 AGDRAYDEAKLYVVEGSAQGVGEQLGESMMPFLKLLLFRCF-------VAFTFSVPLS------Y 318
            |.....||.:            :...|..:..|:||..|..       |....|..||      |
  Rat   256 ALAELKDEKR------------KLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFY 308

  Fly   319 SILTTTELVEGTLHSWPTIIFGLLRLIGALITFAVLDTVGRKFVSLLGL--MCMAGLMLGMA--- 378
            ...:..||......::.||..|::..:..|::..:::..||:.:.||||  ||...:::.:|   
  Rat   309 YSTSIFELAGVEQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLL 373

  Fly   379 -------------GVYG-----DYG----------HIFDD-----------YFMWQVCR--LGMA 402
                         .::|     :.|          .:|..           :..| .|.  :||.
  Rat   374 LERVPSMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNW-TCNFIVGMG 437

  Fly   403 FQF-------FAGFFICSSSAYLGEA---FPMRVK---------PFLIGLIVCLEQ 439
            ||:       ||||   .:....|||   .|:.|:         |:.:.|:..|.|
  Rat   438 FQYVAVGSLPFAGF---PTPVARGEARHPSPLTVRSGTPCLAGGPWKLSLVGLLHQ 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17930NP_650533.1 MFS 98..488 CDD:475125 100/470 (21%)
Slc2a4NP_001416984.1 Interaction with SRFBP1. /evidence=ECO:0000250|UniProtKB:P14672 7..13
MFS_GLUT_Class1 26..451 CDD:340989 95/455 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.