DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17930 and F11D5.5

DIOPT Version :10

Sequence 1:NP_650533.1 Gene:CG17930 / 41979 FlyBaseID:FBgn0038416 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_508570.4 Gene:F11D5.5 / 184346 WormBaseID:WBGene00017382 Length:382 Species:Caenorhabditis elegans


Alignment Length:345 Identity:67/345 - (19%)
Similarity:113/345 - (32%) Gaps:124/345 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 VHGIFGIVFTAIALGSVAITIDSPIFYIRQNQEQKARASVKQLMGSYWTREAGDRAYDEAKLYVV 280
            |..:||::.:.|....:....:||.:.|:|::.::|:.|::...|...|      .::....::.
 Worm    47 VFPLFGMISSTIVFCFMVQLPESPKWLIQQDKVEEAKVSIRFYHGKNCT------IHEVVTSFIK 105

  Fly   281 EGSAQGV----------GEQLGESMMPFLKLLLFRCF----------------VAFTFSVPLSYS 319
            |.:....          .|.|.|.:.....||||..|                ..||....|:.:
 Worm   106 EKNLTDKNRISLKQIWDNETLREGLKIVFALLLFLEFDTSYVTSVYTIDMHKSAGFTVQQALNIN 170

  Fly   320 ILTTTELVEGTLHSWPTIIFG-----------------LLRLIGALITFAVLDTV---GRKFVS- 363
            ::.       |:.|.||..||                 ||:.....|.|::..|:   |..::: 
 Worm   171 LII-------TIFSLPTKFFGTFLSDSIGRRPIFVIAALLQYFRTCIIFSLEITIYIFGSSWLTR 228

  Fly   364 --------LLGLMCMAG-----LMLGMAGVYGDYGHIFDDYFMWQVCRLGMAFQFFAGFFICSSS 415
                    |..|:...|     |:|.|        .:|.......:.:..|......||.|.||.
 Worm   229 ITYNMVEFLAALVSATGVNSLRLLLTM--------ELFPPSARTVIGQTQMIASILIGFPILSSF 285

  Fly   416 AYLGEAFPMRVKPFLIGLIVCLEQVIHIIVIVKFVPTAEFYYTYFVAVGIIMVIGLVAFAVLMPE 480
            ..:...||.                   |..|.||.|.             :::|:..|. .|||
 Worm   286 PIINTMFPP-------------------IFFVPFVITQ-------------LLLGIYLFR-HMPE 317

  Fly   481 TRGLTLRQAGERFRRVHDVM 500
            |||          |.|:|::
 Worm   318 TRG----------RAVYDII 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17930NP_650533.1 MFS 98..488 CDD:475125 64/331 (19%)
F11D5.5NP_508570.4 MFS <1..321 CDD:475125 64/337 (19%)

Return to query results.
Submit another query.