DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17930 and hmit-1.1

DIOPT Version :10

Sequence 1:NP_650533.1 Gene:CG17930 / 41979 FlyBaseID:FBgn0038416 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:559 Identity:94/559 - (16%)
Similarity:191/559 - (34%) Gaps:160/559 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LFVY--AGMDMAQG--LGWNLTAVSANTL----------------EFQYSWFIGV-IIGAVVSAI 114
            ||||  |...:..|  .|::.:.|||..|                |...|...|: .:|:::|..
 Worm    23 LFVYILAAASVIGGFLFGYDTSVVSAAMLYMPDAPGLKPMDTVWQEVLVSISPGMAAVGSLMSGT 87

  Fly   115 TSAFL-PKIVFYGLGGVMNLIDAIIFVSAPYEYESILAARYVGGVGIGLITVPFLIHSAEIASST 178
            :|.:: .:.|..|...:.. |.|:: .:|......:|..|.:.|:.||..::...::..|.|.:.
 Worm    88 SSDYIGRRKVILGASAIFT-IGALV-CAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPTH 150

  Fly   179 NRGTCCALEQYGLALGVAIQVI----------YDSQWSQGLGMTINRVHGIFGIVFTAIALGSVA 233
            .||...|.....::.|..:..|          |:..|         |:...|..|.:.|......
 Worm   151 VRGMLVAAFALMISFGQVVANITGGAFSYIDPYNVGW---------RLMFAFAAVPSIIQFVCFM 206

  Fly   234 ITIDSPIFYIRQNQEQKARASVKQLMGSYWTREAGDR---AYDEAKLYVVEGSAQGVGEQL---G 292
            ...::|.:......|.:.|..::::..       ||:   .|:.|::...........|:.   |
 Worm   207 FLPETPRWLYENGFETETREVLEKVYN-------GDKEWVEYEMAEIIAFNEDQAKENEKAHASG 264

  Fly   293 ESMMPFLKL--LLFRCFV-----AFTFSVPLSYSILTTTELVEGTLHS------WPTIIFGLLRL 344
            ..:...||.  :|..||:     ||.....::..:..|.:::..:..|      |.:::..|...
 Worm   265 PVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSGISNNHTTIWISVLLSLCNF 329

  Fly   345 IGALITFAVLDTVGRKFVSLL--GLMCMAGLMLGMAGVY-----------GDYGHIFD------- 389
            ||..:..::::.|||:.:.|.  ||:.::.:.:|:|.:.           ..||..|:       
 Worm   330 IGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPANQYGSNFNSSYPDAK 394

  Fly   390 --------DY-----------------------------------------------FMWQ---- 395
                    ||                                               |.|:    
 Worm   395 GCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNSNGSIANNFKWEKYYC 459

  Fly   396 --------VCRLGMAFQFFAGFFICSSSAYLGEAFPMRVKPFLIGLIVCLEQVIHIIVIVKFVPT 452
                    :...|:....|:..|.........|.:||..:...:.:......|.::|:.:.::..
 Worm   460 DTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIALTYLSL 524

  Fly   453 AEF---YYTYFVAVGIIMVIGLVAFAVLMPETRGLTLRQ 488
            .:.   |..:::..| :.||..:....|:|||:|.::.:
 Worm   525 TQVIGKYGAFWLYAG-LTVIAFIFILFLVPETKGYSIEE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17930NP_650533.1 MFS 98..488 CDD:475125 82/510 (16%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 85/541 (16%)

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