DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17929 and hmit-1.2

DIOPT Version :10

Sequence 1:NP_650532.2 Gene:CG17929 / 41978 FlyBaseID:FBgn0038415 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:587 Identity:105/587 - (17%)
Similarity:187/587 - (31%) Gaps:206/587 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KCSWFIGVLAGAAL------------ASLTMTFLPKLP-------------------FYVLGGLM 121
            |..:|:.:|..||:            .|..|.::|:.|                   ...:|...
 Worm    21 KLGFFVYLLGSAAIIGGFLFGYDTSVVSAAMLYVPEAPGLKPMGTVWKEVIVSITPGMAAVGAWF 85

  Fly   122 QLTGSIIFTCKPFDYG-----------C--------LLAARYVAGAGIGLITVPFLIHSAEVATD 167
            ...||..:..||...|           |        :|..|...|.|||..::...::..|.:..
 Worm    86 SGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASPT 150

  Fly   168 NHRGVSGSMEQCGLALGIAIQVIYDTQWVDDKEASVNEVHGIIGIVFS-----IIG-------LG 220
            :.||.        |....|:.:.:.           ..|..|:|.|||     .||       .|
 Worm   151 HVRGT--------LVSAFAMMISFG-----------QVVANIMGGVFSYWEPYTIGWRLMFAFAG 196

  Fly   221 MTAL--------SIESPIYYLRIKQKEKARKCHAKLLGSFNHSVDQEFEEIQLYVAESQKRTFCQ 277
            :.||        ..|:|.:.......|:|.:...|:.|.....::.|..||:.|..|.||:...:
 Worm   197 IPALIQFVCFIFLPETPRWLYENGHTEQAEQVLEKIYGGNTEWIEYELAEIKTYAEERQKQMEEE 261

  Fly   278 E------LRISVVPFIKLLLYRGFVAFSFS--------LPLSESLIKSALLTEGFISCWPVTVWG 328
            :      .||...|.:....:.|.:..:|.        |..:..:|:||.:.......|...:..
 Worm   262 KKSGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAGIENYHTIIWISVILS 326

  Fly   329 LVRLLGALVAQGFLDKLGRK----------FVSLVGLLCMAILML-------------CMAASYA 370
            :..|:|......|::||||:          .|||| |:.::.|::             .:|.:|.
 Worm   327 ICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLV-LIGVSFLLVGNDSAPNFDRSAYLLAGNYQ 390

  Fly   371 NPANA---LM----------------------TYYMYQVWRLGLAFQAFAGLFVCSSSV-YLGEA 409
            :...|   ||                      |.:...|....:...:..||  |::.: ....:
 Worm   391 SNGEAESCLMLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSSTGL--CTNGLDKSNSS 453

  Fly   410 FP---------------------IKVKPFFVGYIIGFEQTIHIINIVGYN----------KGYEN 443
            ||                     :.:..:.:.:..||.....::|...|.          ....|
 Worm   454 FPNATSYVWQKHHCTTSYTILPIVMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCVSISTLSN 518

  Fly   444 FFYHY-----YLSV-------------GIILLVGVVFFGIVIPETKKTTLREATKLF--QRLQNI 488
            :.::.     |||:             .|..::..:|...::|||...::.|...||  :|.:||
 Worm   519 WVFNLIIALTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEVEMLFMNKRQRNI 583

  Fly   489 RL 490
            .:
 Worm   584 AM 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17929NP_650532.2 MFS 90..477 CDD:475125 98/568 (17%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:475125 93/551 (17%)

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