DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6901 and VBA4

DIOPT Version :9

Sequence 1:NP_650531.1 Gene:CG6901 / 41977 FlyBaseID:FBgn0038414 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_010404.1 Gene:VBA4 / 851697 SGDID:S000002526 Length:768 Species:Saccharomyces cerevisiae


Alignment Length:414 Identity:85/414 - (20%)
Similarity:159/414 - (38%) Gaps:102/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 TEYSYCWFVGVIIGALATT--------LTMSFLP--KLVYYVFGALMQLTGSIIFTAADYSACLA 134
            :|:...|.:.::|.|...:        |.:|.:.  ||:..:......|.|.:.:::|.:...:.
Yeast   278 SEFHELWRLSLVISAYLLSNAIGQLVFLKLSLISSVKLLLCIAQFSFILGGYLSWSSAHFWTFIF 342

  Fly   135 ARYLAGLGIG-LITVPFLIHNAEVASNNLR-GVNGGM--EQCGLALGIFFQVIFTTEWTSLIDSN 195
            ||.:.|.|.| ||.:...|.|.....|:.| .::..|  ...|:.:|.|..        :|.||:
Yeast   343 ARCVTGFGGGSLIALKSTIMNRFSQKNDSRYSLSASMITFAMGVVIGPFMM--------NLFDSS 399

  Fly   196 PNEIHG-------IIGIVVSLFGLAMTALVVESPIFFLRRNMENRAQQSQEKLLRHNPGGVSAAL 253
                ||       :|.:...|    :.|.::.:.::.::..:..|...:..|..:          
Yeast   400 ----HGSGWRNAFLIPVPFCL----VNASIMLADMYSVKSTLYGRPTPTLWKRFK---------- 446

  Fly   254 KEARRYVAESDNRTLGEELVASVMPFLKMLLF-RCFVAFSFSLPLTMSIISSTAVAEKGLSLWPI 317
                       |..|..:|    ...|.:.|| .|||..: ||.||         ..|..::...
Yeast   447 -----------NTLLSPDL----YEILTLTLFLLCFVQVT-SLDLT---------GLKNNTMIQA 486

  Fly   318 YLFGVLRVIGVMVALI-FLDTLGRKAV--SLVGLLVMAGLMLGLAGLYANVTNLISFN-----LM 374
            .||.|:.|.|::..|| ..||.....:  ||.|...:...|:|::..:|.:..:|.|.     ::
Yeast   487 LLFSVIIVCGILFFLIETSDTYMNSVISMSLQGDKRLIWTMIGISFCFAALMCIIPFGTTYFIIV 551

  Fly   375 TSACNIALA-------FQVFAGLFVCSSSAYMGEAFPMRVKSFLVGVIVIIEQIVHIVVIACVSS 432
            .:...:.||       |.:..|.|   |.:|..::   :.::||:..::....::..|.:..||.
Yeast   552 LNLSTLQLAERLSPFFFSIVLGYF---SVSYFWKS---KGQNFLLKFVLSGATLLLYVALMGVSL 610

  Fly   433 VPNKDFFFQY------FLAVGIIM 450
              |...:.||      ||...:|:
Yeast   611 --NLPVWKQYICLSLPFLGSSMIL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6901NP_650531.1 Sugar_tr 85..469 CDD:278511 84/409 (21%)
MFS <272..457 CDD:119392 47/201 (23%)
VBA4NP_010404.1 MFS 259..>414 CDD:421695 32/147 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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