DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6901 and RGT2

DIOPT Version :9

Sequence 1:NP_650531.1 Gene:CG6901 / 41977 FlyBaseID:FBgn0038414 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_010143.1 Gene:RGT2 / 851417 SGDID:S000002297 Length:763 Species:Saccharomyces cerevisiae


Alignment Length:550 Identity:118/550 - (21%)
Similarity:203/550 - (36%) Gaps:133/550 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TTVDPVPSPPQETIIIATAPPPEPRKPAVTTNNRGYFTRINKQNYASYTVFFLFIYG-GM----- 62
            |..:|......||..|..: .|.|.:..|.:...|.|..:..         |||.|. |:     
Yeast    70 TNNEPAGDGAIETTSILLS-QPLPLRSNVMSVLVGIFVAVGG---------FLFGYDTGLINSIT 124

  Fly    63 DMAASLGWSQPYSVLLFTEYSYCWF-------------VGVIIGALATTL---------TMSFLP 105
            ||        || |..:...::.:|             :|...|||....         |:.|..
Yeast   125 DM--------PY-VKTYIAPNHSYFTTSQIAILVSFLSLGTFFGALIAPYISDSYGRKPTIMFST 180

  Fly   106 KLVYYVFGALMQLTGSIIFTAADYSACLAARYLAGLGIGLITVPFLIHNAEVASNNLRGVNGGME 170
            .:::.:..:|...:|.::.       .:..|.::|:|||:|:....::.||.|..||||......
Yeast   181 AVIFSIGNSLQVASGGLVL-------LIVGRVISGIGIGIISAVVPLYQAEAAQKNLRGAIISSY 238

  Fly   171 QCGLALGIFFQVIFTTEWTSLIDSNPNEIHGIIGIVV---SLFGLAMTALVVESPIFFLRRNMEN 232
            |..:.:|:......:....|  .:.|:.....||:..   |:..:.|..| .|||.:::.::..|
Yeast   239 QWAITIGLLVSSAVSQGTHS--KNGPSSYRIPIGLQYVWSSILAVGMIFL-PESPRYYVLKDELN 300

  Fly   233 RAQQSQEKLLRHNPGGVSAALKEARRYVAESDNRTLGEELV---------ASVMPFLKMLLFRCF 288
            :|.:|...|                |.:...|.|.| ||||         ||..|   ..|..||
Yeast   301 KAAKSLSFL----------------RGLPIEDPRLL-EELVEIKATYDYEASFGP---STLLDCF 345

  Fly   289 VAFSFSLPLTMSIISSTAV----AEKGLSLWPIYLFGV-------------LRVIGVMVALIF-- 334
            ..........:.|.:..|:    ...|::.  |:.:||             :..|...|.:.|  
Yeast   346 KTSENRPKQILRIFTGIAIQAFQQASGINF--IFYYGVNFFNNTGVDNSYLVSFISYAVNVAFSI 408

  Fly   335 -----LDTLGRKAVSLVG--LLVMAGLMLGLAGLYANVTNLISFNLMTSACNIALAFQVFAGLFV 392
                 :|.:||:.|.|.|  ::.:|.|::.:.|:....|.:.|..::...|....||....|..|
Yeast   409 PGMYLVDRIGRRPVLLAGGVIMAIANLVIAIVGVSEGKTVVASKIMIAFICLFIAAFSATWGGVV 473

  Fly   393 CSSSAYMGEAFPMRVKSFLVGVIVIIEQIV---------HIVVIACVSSVPNKDFFFQYFLAVGI 448
            ...||   |.:|:.|:|....:......:|         :||.:...:|......||.:    |.
Yeast   474 WVVSA---ELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMGPKIFFIW----GG 531

  Fly   449 IMLVGMIFFTVSMPETKKMTLRKAGHRFQK 478
            :.:|.:|....::.||:.:||.:....|:|
Yeast   532 LNVVAVIVVYFAVYETRGLTLEEIDELFRK 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6901NP_650531.1 Sugar_tr 85..469 CDD:278511 94/452 (21%)
MFS <272..457 CDD:119392 48/228 (21%)
RGT2NP_010143.1 SP 76..555 CDD:273317 114/536 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342633
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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