DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6901 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_650531.1 Gene:CG6901 / 41977 FlyBaseID:FBgn0038414 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:504 Identity:94/504 - (18%)
Similarity:174/504 - (34%) Gaps:156/504 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 IGALATTLTMSFLPKLVYYVFGALMQLTGSIIFTAADYS--ACLAARYLAGLGIGLITVPFLIHN 154
            ||:|.:.....||.: ...:.||.:..|...|..||.::  ..|..|.|.||.||..::...|:.
 Worm    83 IGSLCSGPGSDFLGR-KKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYV 146

  Fly   155 AEVASNNLRG--VNGGMEQCGLALGIFFQVIFTTEWTSLIDSNPNEIHGIIGIVVS--------- 208
            :|.:.:::||  |.|            ||::.|   ..|:.:|      |||...|         
 Worm   147 SEASPSHIRGKLVTG------------FQLMIT---VGLVIAN------IIGGAFSYVDPDQVGW 190

  Fly   209 --LFGLAMTALVVESPIF-FLRRN-----MENRAQQSQEKLLR----------HNPGGVSAALKE 255
              :|..|....:::...| ||..:     ...|..:::|.|.|          :....:|.:.:|
 Worm   191 RLMFAFAAVPAIIQFVCFLFLPESPRWLYEHGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEE 255

  Fly   256 ARRYVAESDN------RTLGEELVASVMPFLKML-LFRCFVAFSFSLPLTMSIISSTAVAEKGLS 313
            ..|..||...      |.|....|...|....:| :|:.....:..:..|.:||.|..|.:...:
 Worm   256 ELRAKAEHAGNGPTIIRILKTPHVRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTT 320

  Fly   314 LWPIYLFGVLRVIGVMVALIFLDTLGRKA---VSLVGLLVMAGLMLGLAGLYANVTNLISFN--- 372
            :|.......:..:|..:.:..::.:||:.   ||::|:::.. :.:|::.|..|..:|.:|:   
 Worm   321 IWISVGTSAINFLGTFIPIALVERVGRRVLLLVSMIGVILFL-IAMGVSFLLINNDSLRTFDQQN 384

  Fly   373 ---------------LMTSACNIALAFQ------------------------VFAGLFVCS---- 394
                           |..|.|:..:..:                        .::...:|.    
 Worm   385 YTLNYNPSVKHAAKCLKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNL 449

  Fly   395 ---------------------------------SSAYM-------GEAFPMRVKSFLVGVIVIIE 419
                                             |:.|.       .|.:|:..:|..|.|.....
 Worm   450 TNNGTDFEWEDTYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACN 514

  Fly   420 QIVHIVV---IACVSSVPNKDFFFQYFLAVGIIMLVGMIFFTVSMPETK 465
            .|.:::|   ...:|....|  :..:|:..|..| |.::|....:||||
 Worm   515 WIFNLIVSLTFLSLSQAATK--YGTFFIYCGCTM-VALVFVFFFVPETK 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6901NP_650531.1 Sugar_tr 85..469 CDD:278511 94/504 (19%)
MFS <272..457 CDD:119392 40/277 (14%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 90/500 (18%)
MFS <190..>249 CDD:421695 9/58 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158119
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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