DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtSSB and AT3G18580

DIOPT Version :10

Sequence 1:NP_536744.2 Gene:mtSSB / 41968 FlyBaseID:FBgn0010438 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_188488.1 Gene:AT3G18580 / 821389 AraportID:AT3G18580 Length:217 Species:Arabidopsis thaliana


Alignment Length:90 Identity:26/90 - (28%)
Similarity:42/90 - (46%) Gaps:10/90 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ILGRVGADP-QLRGSQEHPVVTFSVAT---HTNYK----YENGDWAQRT--DWHRVVVFKPNLRD 97
            ::|:||..| |.:......|..|||.|   ..|.:    .:..::|.|:  .||||.|:...|.|
plant    85 LVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLAD 149

  Fly    98 TVLEYLKKGQRTMVQGKITYGEITD 122
            .||:.::.|....::|.:.....||
plant   150 LVLKNVEPGTVIYLEGNLETKIFTD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtSSBNP_536744.2 SSB 38..141 CDD:425680 26/90 (29%)
AT3G18580NP_188488.1 SSB 80..190 CDD:425680 26/90 (29%)

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