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Protein Alignment mtSSB and SSBP1
DIOPT Version :9
Sequence 1: | NP_536744.2 |
Gene: | mtSSB / 41968 |
FlyBaseID: | FBgn0010438 |
Length: | 146 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005250105.1 |
Gene: | SSBP1 / 6742 |
HGNCID: | 11317 |
Length: | 159 |
Species: | Homo sapiens |
Alignment Length: | 145 |
Identity: | 58/145 - (40%) |
Similarity: | 87/145 - (60%) |
Gaps: | 16/145 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 PLLTGLRNLPARGATTTTAAAPAKVEKTVNTVTILGRVGADPQLRGSQ-EHPVVTFSVATHTNYK 73
|:|..||......:.|||:.. :|:::|.|.:|||||.||.||..: ::||..||:||:..::
Human 5 PVLQVLRQFVRHESETTTSLV---LERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWR 66
Fly 74 ------YENGDWAQRTDWHRVVVFKPNLRDTVLEYLKKGQRTMVQGKITYGEITDQQGNQKTSTS 132
|:.||.:|:|.|||:.||:|.|||...:|:|||.|..::|||.|||..|:...::.:|:
Human 67 SGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNNVRRQATT 131
Fly 133 IIADD------VLFF 141
|||.. |.||
Human 132 IIAGKKLVKIAVFFF 146
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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