Protein Alignment mtSSB and ssbp1

DIOPT Version :9

• Sequence 1: NP_536744.2
• Gene: mtSSB / 41968
• FlyBaseID: FBgn0010438
• Length: 146
• Species: Drosophila melanogaster
• Sequence 2: NP_001017806.1
• Gene: ssbp1 / 550504
• ZFINID: ZDB-GENE-050417-340
• Length: 146
• Species: Danio rerio
• Alignment Length: 124
• Identity: 53/124 - (42%)
• Similarity: 78/124 - (62%)
• Gaps: 7/124 - (5%)

  Fly    27 TAAAPAKVEKTVNTVTILGRVGADPQLRGSQ-EHPVVTFSVATHTNYKYEN------GDWAQRTD 84
            |..|...:||::|.|.||||||.||.:|..: .:||..||:||:..::...      ||..|:|.
Zfish    18 TTDASLTLEKSINKVQILGRVGQDPVMRQVEGRNPVTIFSMATNEMWRSGEGEPVGAGDVTQKTT 82

  Fly    85 WHRVVVFKPNLRDTVLEYLKKGQRTMVQGKITYGEITDQQGNQKTSTSIIADDVLFFRD 143
            |||:.||||.|||...:|:|||.|..|:||:.|||..|:...::.:|:||||:::|..:
Zfish    83 WHRISVFKPGLRDVAYQYVKKGSRIFVEGKLDYGEYVDKNNVRRQATTIIADNIVFLSE 141

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mtSSB	NP_536744.2	SSB	38..141	CDD:278844	48/109 (44%)
		Ssb	38..>140	CDD:223702	48/108 (44%)
ssbp1	NP_001017806.1	RPA_2b-aaRSs_OBF_like	26..>140	CDD:299125	51/113 (45%)
		Ssb	28..>142	CDD:223702	49/114 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170581477
Domainoid	1	1.000	98	1.000	Domainoid score	I7121
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H74462
Inparanoid	1	1.050	105	1.000	Inparanoid score	I4920
OMA	1	1.010	-	-		QHG46240
OrthoDB	1	1.010	-	-		D1304218at2759
OrthoFinder	1	1.000	-	-		FOG0004077
OrthoInspector	1	1.000	-	-		oto41470
orthoMCL	1	0.900	-	-		OOG6_101436
Panther	1	1.100	-	-	LDO	PTHR10302
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2656
SonicParanoid	1	1.000	-	-		X5103
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	15	14.940