Protein Alignment mtSSB and Ssbp1

DIOPT Version :9

• Sequence 1: NP_536744.2
• Gene: mtSSB / 41968
• FlyBaseID: FBgn0010438
• Length: 146
• Species: Drosophila melanogaster
• Sequence 2: XP_008761044.1
• Gene: Ssbp1 / 54304
• RGDID: 3760
• Length: 151
• Species: Rattus norvegicus
• Alignment Length: 114
• Identity: 49/114 - (42%)
• Similarity: 75/114 - (65%)
• Gaps: 7/114 - (6%)

  Fly    29 AAPAKVEKTVNTVTILGRVGADPQLRGSQ-EHPVVTFSVATH------TNYKYENGDWAQRTDWH 86
            |:...:|:::|.|.:|||||.||.:|..: ::||..||:||:      .|..|:.||.:|:|.||
  Rat    21 ASSLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNEAYQMGDVSQKTTWH 85

  Fly    87 RVVVFKPNLRDTVLEYLKKGQRTMVQGKITYGEITDQQGNQKTSTSIIA 135
            |:.||:|.|||...:|:|||.|..|:||:.|||..|:...::.:|:|||
  Rat    86 RISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNNVRRQATTIIA 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mtSSB	NP_536744.2	SSB	38..141	CDD:278844	47/105 (45%)
		Ssb	38..>140	CDD:223702	47/105 (45%)
Ssbp1	XP_008761044.1	RPA_2b-aaRSs_OBF_like	27..>142	CDD:299125	48/108 (44%)
		Ssb	29..>134	CDD:223702	45/104 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166341476
Domainoid	1	1.000	101	1.000	Domainoid score	I6793
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H74462
Inparanoid	1	1.050	107	1.000	Inparanoid score	I4830
OMA	1	1.010	-	-		QHG46240
OrthoDB	1	1.010	-	-		D1304218at2759
OrthoFinder	1	1.000	-	-		FOG0004077
OrthoInspector	1	1.000	-	-		oto98370
orthoMCL	1	0.900	-	-		OOG6_101436
Panther	1	1.100	-	-	LDO	PTHR10302
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X5103
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	14	13.910