Protein Alignment mtSSB and rim1

DIOPT Version :9

• Sequence 1: NP_536744.2
• Gene: mtSSB / 41968
• FlyBaseID: FBgn0010438
• Length: 146
• Species: Drosophila melanogaster
• Sequence 2: NP_594383.1
• Gene: rim1 / 2541933
• PomBaseID: SPAC2F3.04c
• Length: 150
• Species: Schizosaccharomyces pombe
• Alignment Length: 114
• Identity: 29/114 - (25%)
• Similarity: 55/114 - (48%)
• Gaps: 11/114 - (9%)

  Fly    36 KTVNTVTILGRVGAD-PQLRGSQEHPVVTFSVATHTNYKYENGDWAQRTDWHRVVVFKPNLRDTV 99
            :.:..:|:.|.:..| .:|:..:.:..:.::||::      ||.....| :|.|.||.....|.:
pombe    23 RDIQRLTLTGNLTKDVERLQSQKGNEYMRYTVASN------NGKDVAPT-FHSVYVFDSYNFDRL 80

  Fly   100 LEYLKKGQRTMVQGKITYGEI-TDQQGNQ-KTSTSIIADDVLFF-RDAN 145
            ...|:||.|..|:....:..: ...:|:| |.|...::.||||: |:.|
pombe    81 QTILRKGTRVYVEADAVWRSVPAGNEGSQAKMSLRHVSADVLFYPRNKN 129

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mtSSB	NP_536744.2	SSB	38..141	CDD:278844	26/105 (25%)
		Ssb	38..>140	CDD:223702	25/104 (24%)
rim1	NP_594383.1	SSB	25..124	CDD:278844	26/105 (25%)
		Ssb	27..150	CDD:223702	29/110 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101436
Panther	1	1.100	-	-	LDO	PTHR10302
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.000