DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtSSB and mtSSB

DIOPT Version :10

Sequence 1:NP_536744.2 Gene:mtSSB / 41968 FlyBaseID:FBgn0010438 Length:146 Species:Drosophila melanogaster
Sequence 2:XP_312461.4 Gene:mtSSB / 1273482 VectorBaseID:AGAMI1_001376 Length:138 Species:Anopheles gambiae


Alignment Length:113 Identity:87/113 - (76%)
Similarity:101/113 - (89%) Gaps:0/113 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PAKVEKTVNTVTILGRVGADPQLRGSQEHPVVTFSVATHTNYKYENGDWAQRTDWHRVVVFKPNL 95
            |.::||||||||:|||||||||.||:.|||||.||||||:|||||:|||.|:|||||||||||.|
Mosquito    26 PTRIEKTVNTVTLLGRVGADPQRRGNDEHPVVMFSVATHSNYKYESGDWMQKTDWHRVVVFKPGL 90

  Fly    96 RDTVLEYLKKGQRTMVQGKITYGEITDQQGNQKTSTSIIADDVLFFRD 143
            ||.|:.||||||||||.|||||||||||:|.|:.:||||||||:|.::
Mosquito    91 RDAVMSYLKKGQRTMVTGKITYGEITDQEGKQRGTTSIIADDVIFLQN 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtSSBNP_536744.2 SSB 38..141 CDD:425680 82/102 (80%)
mtSSBXP_312461.4 None

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