DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and ydjK

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_416289.1 Gene:ydjK / 946293 ECOCYCID:G6962 Length:459 Species:Escherichia coli


Alignment Length:416 Identity:96/416 - (23%)
Similarity:161/416 - (38%) Gaps:101/416 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 AIVQTVFMLGVFTGAVTLGGLADKVGRKTVF-CWSALF--QLIIGVGVAFIPEYFSFMVARYLLG 194
            |....:...|:|.||:..|.:.||.||:..| .:.|:.  .:::|   ||.|.....:..|:::|
E. coli    61 ATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVG---AFSPNMDFLIACRFVMG 122

  Fly   195 IVGSAGAYI----CGFVLTM------------ELVGPTKRTVCGITFQAVFAGGI--MLVAGWG- 240
            :  ..||.:    .||...|            ..:|.....:|     ::.|.|:  ::.|.|. 
E. coli   123 V--GLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSYPLC-----SLIAMGLTPLISAEWNW 180

  Fly   241 ---ALIPDRQWLQVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVDI---VAKGLRINGSGIP 299
               .|||      .|..|......  |.:..||||||..:||..||..:   :.:|: |..:|.|
E. coli   181 RVQLLIP------AILSLIATALA--WRYFPESPRWLESRGRYQEAEKVMRSIEEGV-IRQTGKP 236

  Fly   300 VDKEYYVQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVCLC------------WFANSLVYYG 352
            :.........|...|.  ..||.|:.:.    |:...|..|:.            |.....:..|
E. coli   237 LPPVVIADDGKAPQAV--PYSALLTGVL----LKRVILGSCVLIAMNVVQYTLINWLPTIFMTQG 295

  Fly   353 LS------LSAGKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVA-- 409
            ::      |:...::|.|:.|...|            .|:|::.|::      :|.||..::|  
E. coli   296 INLKDSIVLNTMSMFGAPFGIFIAM------------LVMDKIPRKT------MGVGLLILIAVL 342

  Fly   410 AYIAQGSTTSTAVVMAGKLLIAGSFAVIY------NYSAELFPTVVRNSAMGLGSMCARLSGALT 468
            .||....|:...:.:.|..||  :|..:|      .|..|::||..:....||.:...|:||...
E. coli   343 GYIYSLQTSMLLITLIGFFLI--TFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRISGIAA 405

  Fly   469 P--LITLLDSFDPKIPAVLFGVVALI 492
            |  :..||.|:......:|.|.|::|
E. coli   406 PYAVAVLLSSYGVTGVFILLGAVSII 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 96/416 (23%)
ydjKNP_416289.1 MFS_SV2_like 25..426 CDD:340874 93/409 (23%)

Return to query results.
Submit another query.