DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and ynfM

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_416113.1 Gene:ynfM / 946138 ECOCYCID:G6854 Length:417 Species:Escherichia coli


Alignment Length:175 Identity:48/175 - (27%)
Similarity:71/175 - (40%) Gaps:47/175 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 ANSLVYYGLS---LSAGKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCC 406
            |||.:...:|   |:.|.|:..|                    :.|.:||:.:..|.:|...:|.
E. coli    71 ANSSISLSISTAMLAIGLLFTGP--------------------LSDAIGRKPVMVTALLLASICT 115

  Fly   407 IVAAYIA--QGSTTSTAVVMAGKLLIAGSFAVIYNY-SAELFPTVVRNSAMGL-------GSMCA 461
            :::..:.  .|.....|::   .|.::|..||...| |.|:.|:.|..| |||       |.|..
E. coli   116 LLSTMMTSWHGILIMRALI---GLSLSGVAAVGMTYLSEEIHPSFVAFS-MGLYISGNSIGGMSG 176

  Fly   462 RL-SGALTPLITLLDSFDPKIPAVLFGVVALISG--FWVMFLPET 503
            || ||..|      |.|:.:|.....|..||.|.  || ..|||:
E. coli   177 RLISGVFT------DFFNWRIALAAIGCFALASALMFW-KILPES 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 48/175 (27%)
ynfMNP_416113.1 MFS_NepI_like 38..409 CDD:340882 48/175 (27%)

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