DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and AT4G08878

DIOPT Version :10

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_680668.1 Gene:AT4G08878 / 826464 AraportID:AT4G08878 Length:280 Species:Arabidopsis thaliana


Alignment Length:264 Identity:59/264 - (22%)
Similarity:95/264 - (35%) Gaps:79/264 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 VQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLI--IGVGVAFIPEYFSFMVA----RYLL 193
            |..|...|.|.|.:..|.|.||:|||.|:..:.|...|  |...::|..:..:.||.    |:.|
plant    55 VSGVAFAGTFLGQIFFGCLGDKLGRKRVYGLTLLIMTICSIASSLSFGKDPKTVMVTLCFFRFWL 119

  Fly   194 GIVGSAGAYICGFVLTMELVGPTKRTVCGITFQAVF---------AGGIMLVA------------ 237
            |. |..|.|.....:..|..  .||| .|....:||         |||:.|:.            
plant   120 GF-GIGGDYPLSATIMFEYA--NKRT-RGAFIASVFAMQGVGILAAGGVSLLVSYLFEIEFPSRA 180

  Fly   238 ----GWGALIPDRQWLQVIYGLHGCL--FLGHWW--WLDESPRWLWMQGRAAEAVDIVAKGLRIN 294
                |..:.:|...::..|..:.|.|  .|.::|  .:.|:.|:..:..:.||.           
plant   181 YILDGAASTVPQADYVWRIILMVGALPALLTYYWRMKMPETARYTALVAKNAEQ----------- 234

  Fly   295 GSGIPVDKEYYVQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVCLC--WFANSLVYYGLSLSA 357
             :.:.::||.:.:       .:||..|               |.:|..  ||:.    :..|.:.
plant   235 -AALDMNKEIFTE-------VDEKRFA---------------LTICQSENWFSR----FVFSFNF 272

  Fly   358 GKLY 361
            |..|
plant   273 GPNY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 59/264 (22%)
AT4G08878NP_680668.1 2A0109 13..>266 CDD:129965 56/252 (22%)

Return to query results.
Submit another query.