DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and Slc22a4

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_071606.1 Gene:Slc22a4 / 64037 RGDID:621149 Length:553 Species:Rattus norvegicus


Alignment Length:569 Identity:164/569 - (28%)
Similarity:271/569 - (47%) Gaps:83/569 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DYVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPW 68
            ||  ::::..||::|.:|.|.|||...|.:..|.:.:|:|.:|..|||||.:....|.|   :.|
  Rat     3 DY--DEVIAFLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPHTVNLS---SAW 62

  Fly    69 NSSAI------------------------LAAIPLKP-------NGELESCLMFDPSSPGTNTTI 102
            .:.:|                        .:|:.|:|       ..|.||||             
  Rat    63 RNHSIPLETKDGRQVPQSCRRYRLATIANFSALGLEPGLDVDLEQLEQESCL------------- 114

  Fly   103 NCERYVYDTTYYKTSRTIDWNFVCDRRWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSA 167
              :.:.|....:.::...:||.||:..|...:..::|.:||..|:...|.|:|:.|||.|     
  Rat   115 --DGWEYSKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKV----- 172

  Fly   168 LF-QLIIGVGVAFIPEYFS-----FMVARYLLGIVGSAGAYICGFVLTMELVGPTKRT------V 220
            || .:.:..|.:|: :.||     |.|...::| :|....|:..|:|..|::..:.|.      |
  Rat   173 LFATMAVQTGFSFV-QIFSTNWEMFTVLFAIVG-MGQISNYVVAFILGTEILSKSVRILFSTLGV 235

  Fly   221 CGITFQAVFAGGIMLVAGWGALIPDRQWLQVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVD 285
            |  ||   ||.|.|::..:...|.|.:.|.:...|.|...:..||::.||||||..|.|..||..
  Rat   236 C--TF---FAIGYMVLPLFAYFIRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFEEAEQ 295

  Fly   286 IVAKGLRINGSGIPVDKEYYVQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVCLCWFANSLVY 350
            |:.|..::||...|.  ..:.....|:..:.::....:.|||:|.|:...|:...:.|...|:.|
  Rat   296 IIQKAAKMNGIMAPA--VIFDPLELQELNSLKQQKVFILDLFKTRNIATITVMSVMLWMLTSVGY 358

  Fly   351 YGLSLSAGKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRR-SITSTLMLGGGLCCIVAAYIAQ 414
            :.|||:...|:|:.||..|:.||:|.|:|.|...:|..|.|| .|...|..|||:..:|......
  Rat   359 FALSLNVPNLHGDVYLNCFLSGLIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLVQVVPED 423

  Fly   415 GSTTSTAVVMAGKLLIAGSFAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDP 479
            .:..|..:||.||..:..:|:::|.::|||:||:|||.|:|:.||.:|:...:.|....|.:::.
  Rat   424 YNFVSIGLVMLGKFGVTSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNR 488

  Fly   480 KIPAVLFGVVALISGFWVMFLPETMNQPMPESIED-----GENFGKGDT 523
            .:|.:|.|.:.::.|...:|.||:....:||::|.     |...||..|
  Rat   489 LLPYILMGSLTVLIGIITLFFPESFGVTLPENLEQMQKVRGFRCGKKST 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 154/538 (29%)
MFS 130..501 CDD:119392 118/383 (31%)
Slc22a4NP_071606.1 2A0119 12..519 CDD:273328 154/538 (29%)
MFS 123..510 CDD:119392 122/400 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm12322
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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