DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and CG4462

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_650849.1 Gene:CG4462 / 42376 FlyBaseID:FBgn0038752 Length:573 Species:Drosophila melanogaster


Alignment Length:542 Identity:113/542 - (20%)
Similarity:210/542 - (38%) Gaps:104/542 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAV----PEHRC---FIEGVDNSSL 63
            |:.|:   :|:||.:|.....:..|..:.|...|..::.....    .|..|   ::....|||.
  Fly    42 VIADV---VGDFGIWQLRTILIIFLCKIPAAWFMACIIFTGPELYPGSEFTCDTSYLTSSSNSSF 103

  Fly    64 SVTPWNSSAILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDR 128
            |::.                  ..|.:.|.|   |.|:..||::.|.:::  .|..:.:|.||.|
  Fly   104 SISD------------------NQCYVLDES---TGTSSECEQFNYVSSF--DSLIMQFNLVCLR 145

  Fly   129 RWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSFMVARYLL 193
            ....|..|...:.||..|.|....:...:..::.:|..|:.|::.||...:..: ||...|...|
  Fly   146 DIFVAWTQYWHLFGVLVGGVMGTKMMLGISPRSTYCVGAVAQILCGVVTGYARD-FSLHCAFRCL 209

  Fly   194 GIVGSAGAYICGFVLTMELVGPTKRTVCGITFQAVFAGGIMLVAGWGALIPDRQWLQVIYGL--H 256
            ..|..|..:..|..:..::.....|....|.:...::.|::|:.|..:..  ..|..:..|:  .
  Fly   210 SAVCCAIMFTAGQAIFADITAGMHRIGAIILYDTFWSIGVILLPGLSSFF--NSWSLIYVGITFP 272

  Fly   257 GCLFLGHWWWLDESPRWLWMQGRAAEAVD----IVAKGLRINGSG--IPVDKEYYVQKAKQQAAA 315
            ..:.:...:|..:|||||........::|    |:.:|..||...  ||.|....:::..::..|
  Fly   273 TIMLILLLYWTPDSPRWLLRHAADRFSIDNVEQILREGAAINDRSFKIPPDFRQQLEQLSERLKA 337

  Fly   316 EEKSSAGLSDLFRTPNLR--MKTLNVCLCWFANSLVYYGLSLSAGKLYGNPYLI--LFIMGLVE- 375
             :...|..::|::....:  |...::.|.:|.  :.:.|:.|:. :.:|..||:  ...||..| 
  Fly   338 -QPPPAPWTELWKGKRAKTHMVAAHLALAFFV--INFMGMLLNI-RSFGRDYLVPNTIAMGFSEI 398

  Fly   376 FPSYITIVFVLDR-------LGRRSITSTLMLGGGLCCI---------------VAAYIAQGSTT 418
            ...::.:.|.|..       .|..:|     |.|.|.|:               |:.::...:..
  Fly   399 IGCFLALHFTLKHNKWKWQCAGVFNI-----LAGILGCMGWIFTNADSMDADLKVSLWMIIATIP 458

  Fly   419 STAVVMAGKLLIA------------------GSFAVIYNYSAELFPTVVR--NSAMGLGSMC--A 461
            ..||..|..:::|                  .::|.::..||..| .|:|  ::||.|.|.|  :
  Fly   459 KAAVSCAQSMILACMNELMPANKKQLFVFSVVTWARVWLLSAPFF-NVLRKIDTAMSLTSYCVFS 522

  Fly   462 RLSGALTP-LITLLDSFDPKIP 482
            .|.|..|. |:|...|..|.:|
  Fly   523 ILGGICTSLLLTPRLSVSPVVP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 111/533 (21%)
MFS 130..501 CDD:119392 85/411 (21%)
CG4462NP_650849.1 2A0119 <126..532 CDD:273328 86/420 (20%)
MFS 149..>284 CDD:119392 26/137 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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