DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and CG3690

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster


Alignment Length:521 Identity:111/521 - (21%)
Similarity:180/521 - (34%) Gaps:136/521 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 PSSPGTNTTINCERYVYDT---TYYKTSRTIDWNF-VCDRRWMGAIVQTVFMLGVFTGAVTLGGL 153
            |::.||         ||:|   :|...|...|... :.|:    .|:..:...|:.:.||..|.|
  Fly    54 PAAMGT---------VYETSTMSYILPSAECDLKLSLLDK----GILNAITYAGMISSAVLWGYL 105

  Fly   154 ADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSFMVARYLLGIVGSAGAYICGFVLTMELVGPTKR 218
            ||..||:.:.........|..:|.|........||.:||.|...| |.:........||.|...|
  Fly   106 ADIKGRRNLLIVGYAADTICVLGGALSQSRIQLMVFKYLGGFCMS-GPFAVLMTYLTELHGRKHR 169

  Fly   219 ----TVCGITFQ---AVFAGGIMLVAG-------WGALIPDRQWLQVIYGLHGCLFLGHWWWLDE 269
                .:.||.|.   ....|..||:..       |...:...|:...:..|...|....:::..|
  Fly   170 QRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAVTALPSLLSFVLFFFFPE 234

  Fly   270 SPRWLWMQGRAAEAVDIVAKGLRINGSG---------------IPVDKE---------------- 303
            ||::|..:||..||:|.......:|...               :||.|.                
  Fly   235 SPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKKHAKDETIPTELKLPTEC 299

  Fly   304 YYVQKAKQQAAAEEKSSAG---LSDLFRTPNLRMK----TLNVCL--------CW----FAN--- 346
            ..||..:.|.:.:....:|   |..||..|.|.:.    .||.|:        .|    ||:   
  Fly   300 VEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYLLNFCVLLGQNTMRLWLPQLFASINE 364

  Fly   347 ---------------SLVYYGLSLSAGKLYG----------------NPYLILFIMGLVEFPSYI 380
                           :::.|.::.:..:|..                :.|....|:....|.:|:
  Fly   365 YENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIITPSTYTNNLIVAGAGFVAYM 429

  Fly   381 TIVFVLDRLGRRSI-TSTLMLGGGLCCIVAAYIAQGSTTSTAVVMAGKLLIAGSFAV--IYNYSA 442
            ...|:::.:|.:.| ||.|::..|  |.:..|  ..|:.::.|.:|...:..||.:.  :.:.|.
  Fly   430 LAGFLVNLVGVKLIMTSGLLIAAG--CSIGMY--WSSSAASTVALASLFVTMGSISATSVISASV 490

  Fly   443 ELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDPKI-------PAVLFGVVALISGFWVMFL 500
            .||||.:|...:.|..|..||...|..:      |.|.:       |.::.....|...|...||
  Fly   491 SLFPTSLRTMIVSLEMMFGRLGSLLGNI------FFPALMGLGCVPPFLMISAFMLAGCFMAAFL 549

  Fly   501 P 501
            |
  Fly   550 P 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 111/521 (21%)
MFS 130..501 CDD:119392 99/478 (21%)
CG3690NP_001284764.1 SP 42..549 CDD:273317 108/518 (21%)
MFS 49..>195 CDD:119392 40/154 (26%)
MFS 419..>550 CDD:119392 34/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.