DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and Slc22a17

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_803156.2 Gene:Slc22a17 / 305886 RGDID:631405 Length:520 Species:Rattus norvegicus


Alignment Length:494 Identity:127/494 - (25%)
Similarity:205/494 - (41%) Gaps:62/494 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NSSLSVTPWNSSAI-LAAIPLKPNGELESCLMFDPS-----SPGTNTTINC-ERYVYDTTYYKTS 117
            |:|....|.|||.: :|...|..:.........|||     .|..|   :| :.:.|:.....|:
  Rat    23 NASGWEQPPNSSGVSVAGAALAASAASRVVTSTDPSCSGFAPPDFN---HCLKDWDYNGLPVLTT 84

  Fly   118 RTI-DWNFVCDRRWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIP 181
            ..| .|:.|||..|...:.|.:|:||..:|.:.||..||:.||:.:...:.......|||.|...
  Rat    85 NAIGQWDLVCDLGWQVILEQILFILGFASGYLFLGYPADRFGRRGIVLLTLGLVGPCGVGGAAAG 149

  Fly   182 EYFSFMVARYLLGIVGSAGAYICGFVLTMELVGPTKRTVCGITFQAVFAGGIMLVAGWGALIPDR 246
            .....|..|:|||.: .||..:..:::.:||..||:|....:..:.|..||..|..|...:..|.
  Rat   150 SSTGIMTLRFLLGFL-LAGVDLGVYLMRLELCDPTQRLRVALAGELVGVGGHFLFLGLALVSKDW 213

  Fly   247 QWLQVIYGLHGCLFLGHWW---WLDESPRWLWMQGRAAEA---VDIVAKGLRINGSGIPVDKEYY 305
            ::||.:......|||.:.|   :| ||.|||.::.:..||   :.|:|:..|.:|..:..:.:..
  Rat   214 RFLQRMITAPCILFLFYGWPGLFL-ESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEA 277

  Fly   306 VQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVCLCWFANSLV------------------YYG 352
            :|:.:........|:...:.|.   |.|....|:.:..|.|.:.                  :|.
  Rat   278 LQELENTCPLPTTSTFSFASLL---NYRNIWKNLLILGFTNFIAHAIRHCYQPVGGGGSPSDFYL 339

  Fly   353 LSLSAGKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAA----YIA 413
            .||.|.   |...|....:|:           .:||.|||.|....|...|:..:|..    |:.
  Rat   340 CSLLAS---GTAALACVFLGV-----------TVDRFGRRGILLLSMTLTGIASLVLLGLWDYLN 390

  Fly   414 QGSTTSTAVVMAGKLLIAGSFAVIYN-YSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSF 477
            ..:.|:.:|:   .|..:.:.|::.. .:||:.||.||...:||......|.|...|...|....
  Rat   391 DAAITTFSVL---GLFSSQASAILSTLLAAEVIPTTVRGRGLGLIMALGALGGLSCPAQRLHMGH 452

  Fly   478 DPKIPAVLFGVVALISGFWVMFLPETMNQPMPESIEDGE 516
            ...:..|:....||:....:|.||||..:.:||.:.|||
  Rat   453 GAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGE 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 122/486 (25%)
MFS 130..501 CDD:119392 97/399 (24%)
Slc22a17NP_803156.2 MFS 106..476 CDD:119392 95/391 (24%)
2A0114 111..475 CDD:273326 92/385 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.