DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and LOC303140

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_008765965.1 Gene:LOC303140 / 303140 RGDID:1561735 Length:555 Species:Rattus norvegicus


Alignment Length:555 Identity:167/555 - (30%)
Similarity:265/555 - (47%) Gaps:75/555 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DYVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPW 68
            ||  ::|...|||:|.:|.|.|||...|.:..|...||.|.:.|.|||||.:....|.|   :.|
  Rat     3 DY--DELTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSAVFLTASPEHRCLVPDTVNLS---SAW 62

  Fly    69 NSSAI------------------------LAAIPLKPNG-------ELESCLMFDPSSPGTNTTI 102
            .:.:|                        .:|:.|:|..       |||:||             
  Rat    63 RNHSIPLEMKDGRQVPHKCRRYRLATIANFSALGLEPGEDVDLKQLELENCL------------- 114

  Fly   103 NCERYVYDTTYYKTSRTIDWNFVCDRRWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSA 167
              :.:.|....:.::...:||.||:..|...:..::|.:||..|:...|.|:|:.|||.|..|: 
  Rat   115 --DGWEYSKEVFLSTIVTEWNLVCNDAWKAPLTTSMFYVGVLLGSFISGQLSDRFGRKPVLFWT- 176

  Fly   168 LFQLIIGVGVAFIP------EYFSFMVARYLLGIVGSAGAYICGFVLTMELVGPTKRTV---CGI 223
               :.:..|.:|:.      |.|:.:.|  |:| :|....|:..|||..|::..:.|.:   .||
  Rat   177 ---MGMHTGFSFLQVFSVNFEMFTLLFA--LVG-MGHISNYVAAFVLGTEILSKSIRIIFATLGI 235

  Fly   224 TFQAVFAGGIMLVAGWGALIPDRQWLQVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVDIVA 288
            ..  .||.|.|::..:...|.|.:.|.:...|.|.|....||::.||||||..|||..||..|:.
  Rat   236 CI--FFAFGFMVLPLFAYFIRDWRMLLMAITLPGVLCGALWWFIPESPRWLISQGRVKEAEVIIR 298

  Fly   289 KGLRINGSGIP---VDKEYYVQKAKQQAAAEEKSSAGLSDLFRTPNLRMKTLNVCLCWFANSLVY 350
            |..:.||...|   .|......  .|...|:...|..:.||.||.|:|:.|:...:.|...|:.|
  Rat   299 KAAKFNGIVAPSTIFDPSETTN--LQDGNAKNTQSHHIYDLVRTRNIRILTIMSIILWLTISVGY 361

  Fly   351 YGLSLSAGKLYGNPYLILFIMGLVEFPSYITIVFVLDRLGRR-SITSTLMLGGGLCCIVAAYIAQ 414
            :||||....|.||.|:..|::..||.|:|:....:|..:.|| |:..:|.|||.:..|:....:.
  Rat   362 FGLSLDTPNLNGNIYVNGFLLAAVEVPAYVLAWLLLQHVTRRYSMAGSLFLGGSVLLILQLVPSD 426

  Fly   415 GSTTSTAVVMAGKLLIAGSFAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDP 479
            ....|||:||.||..|..:::::|.|:|||:||||||..:|:.|..:||...|:|....|.::|.
  Rat   427 LLYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDR 491

  Fly   480 KIPAVLFGVVALISGFWVMFLPETMNQPMPESIED 514
            .:|.::.|.:.:::.....|.||:....:|::|::
  Rat   492 HLPYIVMGSLTILTAIITFFFPESSGVSLPDTIDE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 161/538 (30%)
MFS 130..501 CDD:119392 123/383 (32%)
LOC303140XP_008765965.1 2A0119 12..523 CDD:273328 162/539 (30%)
MFS 123..513 CDD:119392 127/400 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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