DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and svop-1

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:550 Identity:118/550 - (21%)
Similarity:198/550 - (36%) Gaps:140/550 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YVLEDLMGKLGEFGKYQFLQFFLQVLSGL-----TAGMHMLSLVTVAAVPEHRCFIEGVDNSSLS 64
            :.:::.:..|| ||::|..   |.:|:|:     ...|.:|||::.|...|              
 Worm    67 FTVDEAVEALG-FGRFQLK---LSILTGMAWMADAMEMMLLSLISPALACE-------------- 113

  Fly    65 VTPWNSSAILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRR 129
               |..|::                                                        
 Worm   114 ---WGISSV-------------------------------------------------------- 119

  Fly   130 WMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSFMVARYLLG 194
             ..|:|.|....|:...:...|.:.|:.||:....:|.|...|:||.....|.::..:..|.|.|
 Worm   120 -QQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTG 183

  Fly   195 IVGSAGAYICGFVLTMELVGPTKRTVC----------GITFQAVFAGGIMLVAGWGALIPDRQWL 249
            .  ..|.......|..|.:...:|..|          |..|:|:.|..:|...||.||:      
 Worm   184 F--GIGGVPQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGWRALM------ 240

  Fly   250 QVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRINGSGIPVDKEYYVQKAKQQAA 314
             .:..|...:|....:||.||.|:....|....|::.:....|:|...:|..:  .|...|    
 Worm   241 -FLSSLPLGIFAVASFWLPESARFDMASGHPERALETLQAAARMNRVQLPTGR--LVSSTK---- 298

  Fly   315 AEEKSSAGLSDLFRTPNLRMKTLNVCLCWFANSLVYYGLSLSA-----------GKLYGN----- 363
            |..:|...:::|. :|:||..|:.:...|...:..|||:.|..           |.|:.|     
 Worm   299 AGSESRGDIANLL-SPDLRKTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQME 362

  Fly   364 --------PYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVA--AYIAQGSTT 418
                    .|..|....|.|||..|..|.:::..||:   .|:.|...:..|..  .|......|
 Worm   363 VCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRK---KTMALEYAVFAIFTFLLYFCLDRFT 424

  Fly   419 STAVVMAGKLLIAGSFAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDP-KIP 482
            .|.::...:..|:|:|...|.|:.|::||.:|...:|..|..||:...:||.|..:.|... .:|
 Worm   425 VTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLP 489

  Fly   483 AVLFGVVALISGFWVMFLP-ETMNQPMPES 511
            ..::|..|::.....:.|| ||..:.|.:|
 Worm   490 IGIYGTAAILGLIASLSLPIETKGRQMMDS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 116/537 (22%)
MFS 130..501 CDD:119392 96/407 (24%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 116/543 (21%)
MFS 87..508 CDD:119392 106/513 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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