DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and B0252.3

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:414 Identity:101/414 - (24%)
Similarity:180/414 - (43%) Gaps:48/414 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 DWNFVCDRRWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFS 185
            :::...|..|:.....|.:|:|...|.:.:..|||..||..||..:.|...:.|:..||......
 Worm    82 EFDLTGDASWLAESTTTFYMVGNMIGGMFIPPLADHYGRLPVFVATVLLMAVGGMISAFSTSIMM 146

  Fly   186 FMVARYLLGIVGSAGAYICGFVLTMELVGPTKRTVCGITFQAVFAGGIMLVAGWGALIPDRQWLQ 250
            |.:.|.:.||..:| |.:.|:||..|......|....:.|..::..|...:.....::||  |..
 Worm   147 FCIMRMIHGIFYTA-AGLAGWVLGYENTPLRLRFFTSVYFGVMWVVGACFLGLLAYILPD--WRY 208

  Fly   251 VIYGLHGCLFLGH-------WWWLDESPRWLWMQGRAAEAVDIVAKGLR-----INGSGIPVDKE 303
            :::    |:.:.:       :..:.||..:| :..:..|.::...:.:|     |:.|.|..|::
 Worm   209 LMF----CISVPNIFVALLIYMTVPESLHFL-VSSQQNEKIEAWLEKIRGPKGDISASDIVEDRD 268

  Fly   304 YYVQKAKQQAAAEEKSSAGLSDLFRTPNLRM--------KTLNVCLCWFANSLVYYGLSLSAGKL 360
                        |..||      |:|....|        ..|.:...|..::.:|:||:..:..|
 Worm   269 ------------ENGSS------FKTLCREMWKHKMFIVYVLVMTYIWIVDTFIYFGLAFYSTNL 315

  Fly   361 YGNPYLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAVVMA 425
            .||.||...:|.|||.|:||.....:::.||:.:.|...:..||..:  ..:...........:.
 Worm   316 AGNLYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLSFL--GIVLSSEAWHIHFWLL 378

  Fly   426 GKLLIAGSFAVIYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDPKIPAVLFGVVA 490
            ||..|:.||..||.:::|:|||..||..:|.....:|..|.|:|.::.|.:.....||:...::|
 Worm   379 GKFAISCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSPYLSHLTAVHALAPAITLSLIA 443

  Fly   491 LISGFWVMFLPETMNQPMPESIED 514
            :..|...:.||||:|..:|.:|.:
 Worm   444 VSGGLLTLILPETLNTKLPSTIAE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 99/408 (24%)
MFS 130..501 CDD:119392 93/390 (24%)
B0252.3NP_001021888.1 MFS 87..454 CDD:119392 94/394 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.