DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and oct-1

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:562 Identity:177/562 - (31%)
Similarity:271/562 - (48%) Gaps:38/562 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DYVLEDLMGKLGEFGKYQFLQFFLQVL-SGLTAGMHMLSLVTVAAVPEHRCFI-EGV-------- 58
            |:|||    ::|.:|.||.:.||:..| :.|.:.....::..|...|.|.|.| ||.        
 Worm    27 DFVLE----QVGNYGTYQIVFFFIICLPTSLPSAFSAFNIPFVVGNPPHTCHIPEGKEYLRPLTN 87

  Fly    59 DNSSLSVTPWNSSAI--LAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTID 121
            |...||...:|.:.|  ..|....|.......:...|...|         :.||.:.|..|...:
 Worm    88 DTQILSCKQYNETQINVFRAFTSAPVDTYSDRISLVPCQNG---------WDYDNSTYLDSLVTE 143

  Fly   122 WNFVCDRRWMGAIVQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSF 186
            :|.|||::....|..|.|.:|.|.|....|.:|||.||:..|.......::.|...:|..:..||
 Worm   144 FNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIESF 208

  Fly   187 MVARYLLGIVGSAGAYICGFVLTMELVGPTKRTVCGITFQAVFAGGIMLVAGWGALIPDRQWLQV 251
            ::.|:..|:...| .:...|::.||.:|.:.|...|: ..::|.|..|.:.|..|:. .|:|.|:
 Worm   209 IILRFFTGLAFPA-LFQIPFIICMEFMGNSGRIFSGL-MTSLFFGAAMALLGVVAMF-IRRWRQL 270

  Fly   252 IYGLHG--CLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRING-SGIPVDKEYYVQKAKQQA 313
            .:..:.  ..::.::::|.|||||....|:.|:|...:.|..::|| |.:.||:.....|..|.|
 Worm   271 TFFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMKNHQNA 335

  Fly   314 AAEE--KSSAGLSDLFRTPNLRMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPYLILFIMGLVEF 376
            |.|:  |.|..::|||:|||||.|||.|...|..|:::|.||:|:...|..:.|....|.|.||.
 Worm   336 AEEKETKRSHNVTDLFKTPNLRRKTLIVTYIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVEL 400

  Fly   377 PSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTA-VVMAGKLLIAGSFAVIYNY 440
            |.|..:..:|...|||...:..|:..|:.|:.|.::..|.....| ....||..:...|||||.:
 Worm   401 PGYFVVWPLLQCAGRRWTLAATMIVCGIGCVSAMFMPDGYPWLVASASFIGKFGVGSGFAVIYIF 465

  Fly   441 SAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDSFDPKIPAVLFGVVALISGFWVMFLPETMN 505
            :.||:|||||...||:.||.|.....|.|.|..|......:|.::.|::||.:|....|||||:.
 Worm   466 AGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIVKILPLLIMGLMALSAGILTFFLPETLG 530

  Fly   506 QPMPESIEDGENFGK----GDTWFSQCAGRKKRQNSVYPDDP 543
            .|:|.:|||.|||||    ....|:|.|.:::.|..:.|..|
 Worm   531 APLPMTIEDAENFGKKPEPDSGMFTQAAKKRESQPLLEPHTP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 158/512 (31%)
MFS 130..501 CDD:119392 121/376 (32%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 159/513 (31%)
MFS 134..526 CDD:119392 127/394 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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