DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and sv2b

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:682 Identity:129/682 - (18%)
Similarity:212/682 - (31%) Gaps:280/682 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPWN 69
            |..|:::.:.|. |::|:..|.:..|:.:..|:.:              |:.|.           
 Frog   121 YQYENIIQECGH-GRFQWTLFVVLGLALMADGVEV--------------FVVGF----------- 159

  Fly    70 SSAILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRWMGAI 134
                     :.|:.|.:.||                           ||:       ::..:|.|
 Frog   160 ---------VLPSAEKDMCL---------------------------SRS-------NKGMLGLI 181

  Fly   135 VQTVFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSFMVARYLLGIVGSA 199
            |    .||:..||...||||||||||.....|...........:|:..|..|:..|.:.|. |..
 Frog   182 V----YLGMMLGAFVWGGLADKVGRKKCLIISLTINAAFSFVSSFVQGYGLFLFCRLISGF-GIG 241

  Fly   200 GAYICGFVLTMELVGPTKR-----TVC-----GITFQAVFAGGIMLVAGWGALIPDRQWLQVIYG 254
            |:....|....|.:...||     .:|     |..:.|..|..|:...|||..:          |
 Frog   242 GSLPIVFAYFSEFLAREKRGEHLSWLCMFWMIGAVYAAAMAWSIIPHYGWGFSM----------G 296

  Fly   255 LHGCLFLGHWW-------------------WLDESPRWLWMQGRAAEAVDIVAK----GLRINGS 296
            .|   :..|.|                   ::.||||:|...|:..||..|:..    .:|..|.
 Frog   297 TH---YHFHSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMRAKGE 358

  Fly   297 GIPVDKEYYVQKAKQ-QAAAEEKSSAG-------------LSDLFR------TPNLRMKTLNVCL 341
            ...|....:::..|| ....|.:||.|             :..::.      :...|..|:.:.:
 Frog   359 PEKVFTVSHIKTPKQPDEFIEIQSSTGTWFQRWFVRIMTVIKQIWENMLHCFSGQFRKNTIFLAV 423

  Fly   342 CWFANSLVYYGLSL--------------------------------------------------- 355
            .||..||.||||::                                                   
 Frog   424 VWFTMSLSYYGLTVWFPDTIRYLQDEDYASKVKRFTDENVKNFNFNFTLENQIHEDGEYYNDRFY 488

  Fly   356 -----------------------SAGKLYGN------------------------------P--- 364
                                   |.|.::.|                              |   
 Frog   489 KMKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFIDCNFINVTFSQPKEG 553

  Fly   365 -------------YLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGS 416
                         ||:.|:..|...|..|....::|::||..:.:..||...:||.   ::..|:
 Frog   554 CHIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLISAVCCF---FLFFGN 615

  Fly   417 TTSTAVVMAGKLLIAGSFAVIYN----YSAELFPTVVRNSAMG-LGSMC--ARLSGALTPLITLL 474
              |.:.::..:.|..|:....:|    .:.||:||..|.:|.| |..:|  |.:.|.     ::.
 Frog   616 --SESAMIGWQCLFCGTSIAAWNALDVVTVELYPTNKRATAFGILNGLCKLAAIFGN-----SIF 673

  Fly   475 DSF--DPKIPAVLFGVVALISGFWV-MFLPET 503
            .||  ..|:..:|....||:.|..: :.||||
 Frog   674 ASFVGITKVIPILLASTALVGGGLISLRLPET 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 127/672 (19%)
MFS 130..501 CDD:119392 109/553 (20%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 129/682 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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