DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and sv2c

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_002934873.1 Gene:sv2c / 100490137 XenbaseID:XB-GENE-960877 Length:725 Species:Xenopus tropicalis


Alignment Length:673 Identity:131/673 - (19%)
Similarity:211/673 - (31%) Gaps:280/673 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPWNSSAILAAIPLKPN 82
            |::|:..||:..::.:..|:.:              |:.|.                    :.|:
 Frog   146 GRFQWTLFFVLGMALMADGVEV--------------FVVGF--------------------VLPS 176

  Fly    83 GELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRWMGAIVQTVFMLGVFTGA 147
            .|.:.|:   |.| |:.                              |:|:||    .||:..||
 Frog   177 AETDMCI---PDS-GSG------------------------------WLGSIV----YLGMMVGA 203

  Fly   148 VTLGGLADKVGRK--TVFCWS--ALFQLIIGVGVAFIPEYFSFMVARYLLGIVGSAGAYICGFVL 208
            ...||||||||||  .:.|.|  ..|..:    .:|:..|..|:|.|.|.|. |..||....|..
 Frog   204 FFWGGLADKVGRKQSLLICMSVNGFFAFL----SSFVQGYGLFLVCRLLSGF-GIGGALPTAFSY 263

  Fly   209 TMELVGPTKRTVCG--ITFQAVF--AGGIMLVAGWGALIPDRQWLQVIYGLHGCLFLGHWW---- 265
            ..|::...||   |  :::..:|  .|||...|...|:||...|...:    |..:..|.|    
 Frog   264 FSEVLAREKR---GEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSM----GSAYQFHSWRVFV 321

  Fly   266 ---------------WLDESPRWLWMQGRAAEAVDIVAK----GLRINGSGIPVDKEYYVQKAKQ 311
                           ::.||||:|...|:..||..|:.:    .:|..|.   .:|.:.||:.|.
 Frog   322 IVCALPCVSAVVALTFMPESPRFLLETGKHDEAWMILKQIHDTNMRARGE---PEKVFTVQRIKT 383

  Fly   312 QAAAEE----KSSAG--------------------LSDLFRTPNLRMKTLNVCLCWFANSLVYYG 352
            ....:|    :|..|                    ....|..| ::..|:.:.:.|...|..|||
 Frog   384 PKQIDELIEIESDTGTWYKRCFVRIRTEFYGIWLTFMRCFEYP-VKDNTIKLTIVWLTLSFGYYG 447

  Fly   353 LSL-------------------------------------------------------------- 355
            ||:                                                              
 Frog   448 LSVWFSDVIKHLQADEYASRVKRFNGSTIADYKFNYTLENQIHKNAVFINDRFISMKFKSVVFQD 512

  Fly   356 ------------SAGKLYGN------------------------------P-------------- 364
                        |....:.|                              |              
 Frog   513 SLFERCYFEDVTSINTYFRNCTLIDTHFVNTDLEKYKFTDSQTINCTFTIPKIGCQITFDDDYSA 577

  Fly   365 ---YLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAVVMAG 426
               |.:.|:..|...|..|....::|::||.::....|:..|:.|.:..:   |::.|   :|.|
 Frog   578 YWIYFVNFLGTLAVLPGNIVSALLMDKIGRLTMLGGSMVLSGISCFLLWF---GTSES---MMVG 636

  Fly   427 KLLIAGSFAV-IYN----YSAELFPTVVRNSAMG-LGSMC--ARLSGALTPLITLLDSFDPKIPA 483
            .|.:.....: .:|    .:.||:||..|.:..| |.::|  |.:.|.|  :...|......||.
 Frog   637 MLCVYNGLTISAWNSLDVVTVELYPTDKRATGFGFLNALCKGAAVLGNL--IFGSLVGITKAIPI 699

  Fly   484 VLFGVVALISGFWVMFLPETMNQ 506
            :|...|.:..|...:.||:|.||
 Frog   700 LLASAVLVGGGLVGLRLPDTRNQ 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 131/673 (19%)
MFS 130..501 CDD:119392 113/554 (20%)
sv2cXP_002934873.1 synapt_SV2 1..725 CDD:130366 131/673 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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