DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6126 and sv2ba

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:685 Identity:134/685 - (19%)
Similarity:200/685 - (29%) Gaps:290/685 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSVTPWNSSA 72
            |.:|...|. |::|:..|.|..|:.:..|:              .||:.             |.|
Zfish   100 ESIMEDCGH-GRFQWTLFTLLGLALMADGV--------------ECFVV-------------SFA 136

  Fly    73 ILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRWMGAIVQT 137
            :       |:.|.:.||        :|                          .|:..:|.||  
Zfish   137 L-------PSAEKDMCL--------SN--------------------------ADKGMLGLIV-- 158

  Fly   138 VFMLGVFTGAVTLGGLADKVGRKTVFCWSALFQLIIGVGVAFIPEYFSFMVARYLLGIVGSAGA- 201
              .:|:..|||..||||||:|||....::.....|......|...|..|:..|...|| |..|: 
Zfish   159 --YVGMMIGAVVWGGLADKLGRKQCLLYALAINCIFSFLSCFAQGYGFFIFFRLCSGI-GIGGSI 220

  Fly   202 -----YICGFVLTMELVGPTKRTVC-----GITFQAVFAGGIMLVAGWGALIPD----RQW---- 248
                 |...| |.|:..|.....:|     |..:.:..|.||:...|||..:..    ..|    
Zfish   221 PVVYTYYAEF-LQMDKRGEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSMGTEFQFHSWRVFV 284

  Fly   249 ----LQVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRIN--GSGIPVDKEYYVQ 307
                |..:..|.|.:|      :.||||:|....|..||..|:.:....|  ..|.| ::.:.|.
Zfish   285 LVCFLPSVAALAGLVF------MPESPRFLLESARHDEAWMILRRVHDTNWGAKGEP-ERVFQVS 342

  Fly   308 KAKQQAAAEE-----KSSAG---------------------LSDLFRTPNLRMKTLNVCLCWFAN 346
            :.|.....::     :|..|                     ||  ...|::|:..|.:.:.||..
Zfish   343 QIKTPQTQDDEFIEIQSETGTAFQRFMVRQMTLVKQVMKNMLS--LAAPDVRLHGLFIAIVWFTM 405

  Fly   347 SLVYYGL---------------------------------------------------------- 353
            :..||||                                                          
Zfish   406 AFSYYGLGTWFPDQIKYLQFEEYESNVKIFHRERVERFHFNFTLQNQLHKEGEYVHDRFINIEIR 470

  Fly   354 ---------------------------SLSAGKLYGNP--------------------------- 364
                                       :|.....|...                           
Zfish   471 NVKFEDSLFENCYFEDIKSTETFFENCTLKNTVFYNTDLWEDSKFINCNLENTTFLHPKKGCHLN 535

  Fly   365 ---------YLILFIMGLVEFPSYITIVFVLDRLGRRSITSTLMLGGGLC------CIVAAYIAQ 414
                     ||..|:..|...|..|....::|::||..|....|||..:|      |.       
Zfish   536 FQEENDILIYLDSFLGSLSVIPGNILAGLLMDKIGRLKIIGGSMLGSAVCTFFLLLCF------- 593

  Fly   415 GSTTSTAVVMAGKLLIAGSFAV---IYNYSAELFPTVVRNSAMGLGSMCARLSGALTPLITLLDS 476
               :..|||:...|..|...|.   |...:.||:|...|.:|.|:      |:|. ..|..::.|
Zfish   594 ---SQWAVVLFQCLFFAAGAAAWNGIEVVTVELYPASKRATAFGV------LNGT-CKLAAIISS 648

  Fly   477 F-------DPKIPAVLFGVVALISGFWVMF-LPET 503
            |       ..||..::....||:.|..:.| ||||
Zfish   649 FIFGKFIGITKIIPIILSFSALVCGGLLAFKLPET 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 132/678 (19%)
MFS 130..501 CDD:119392 111/559 (20%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 134/685 (20%)
MFS 116..678 CDD:119392 124/661 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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