DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6126 and sv2bb

DIOPT Version :9

Sequence 1:NP_650528.1 Gene:CG6126 / 41967 FlyBaseID:FBgn0038407 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_005161575.1 Gene:sv2bb / 100006427 ZFINID:ZDB-GENE-030131-2789 Length:687 Species:Danio rerio


Alignment Length:690 Identity:140/690 - (20%)
Similarity:216/690 - (31%) Gaps:289/690 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVDYVLEDLMGKLGEFGKYQFLQFFLQVLSGLTAGMHMLSLVTVAAVPEHRCFIEGVDNSSLSV 65
            :|..|  ||:|...|. ||:|:..|.            :|.|..:|...|  ||:          
Zfish    94 LAEQY--EDIMEDCGH-GKFQWTLFV------------VLGLALMADSVE--CFV---------- 131

  Fly    66 TPWNSSAILAAIPLKPNGELESCLMFDPSSPGTNTTINCERYVYDTTYYKTSRTIDWNFVCDRRW 130
                     .|:.| |:.|.:.||..                                  .::..
Zfish   132 ---------VALVL-PSAEKDMCLSH----------------------------------AEKGM 152

  Fly   131 MGAIVQTVFMLGVFTGAVTLGGLADKVGRK-------TVFCWSALFQLIIGVGVAFIPEYFSFMV 188
            :|.||    .||:..||...|||||||||:       .:.|.||.|.       :|...|..|:.
Zfish   153 LGLIV----FLGMMFGAFIWGGLADKVGRRKCLIIVLAMNCISAFFS-------SFAQGYGFFLF 206

  Fly   189 ARYL--LGIVGSAG---AYICGFVLTMELVGPTKRTVC-----GITFQAVFAGGIMLVAGWGALI 243
            .|..  :||.||..   :|...| |.|:..|.....:|     |..:.:..|.||:...|||..:
Zfish   207 FRLFSGIGIGGSVPIVYSYFSEF-LQMDKRGEHLSWLCMFWMMGGIYASFTAWGIIPRYGWGFSM 270

  Fly   244 PD----RQW--------LQVIYGLHGCLFLGHWWWLDESPRWLWMQGRAAEAVDIVAKGLRIN-- 294
            ..    ..|        |..|....|.:|      :.||||:|....:..||..|:.:....|  
Zfish   271 GTEFQFHSWRVFVLVCALPAIAAFVGLMF------MPESPRFLLENAKHDEAWMILKQVHDTNWR 329

  Fly   295 GSGIPVDKEYYV-----QKAKQQAAAEEKSSAGLS--------------------DLFRTPNLRM 334
            ..|.| :|.:.|     .|.::....|.:::.|.:                    .||.. .||:
Zfish   330 AKGQP-EKVFTVTQIRTPKTQEDEFIEIQTATGTAFQRWVVRTLTLTKLVIKNVLSLFGR-ELRL 392

  Fly   335 KTLNVCLCWFANSLVYYGLSL-------------------------------------------- 355
            .||.:.:.||..:..|||||:                                            
Zfish   393 ATLLMAIIWFTMAFSYYGLSVWFPDMIKHLQHEEYESKVKVFHREKVEQFHFNFSLENQVHKEGE 457

  Fly   356 ------------------------------SAGKLYGN--------------------------- 363
                                          |...::.|                           
Zfish   458 YINDKFINIEMKSVKFEDSLFVDCFFENVRSTETMFENCTIRSTVFYDTDLYEEKFIDCTMENVT 522

  Fly   364 -------------------PYLILFIMGLVEFPSYITIVFVLDRLGR-RSITSTLMLGGGLCCIV 408
                               .||:.|:..|...|..|.....:|::|| :.|..::::..|  |..
Zfish   523 FLHNKKGCHLDYEEDNDVLIYLVSFLGSLAVLPGNIISALFMDKIGRIKIIGGSMLVSAG--CTF 585

  Fly   409 AAYIAQGSTTSTAVVMAGKLLIAGSFAVIYN----YSAELFPTVVRNSAMG-LGSMC--ARLSGA 466
            ..::    :.|.|.::|.:.|..|.....:|    .:.||:|...|.:|.| |.:||  |.:.|:
Zfish   586 FLFL----SFSQAAIIAWQCLFYGVSVAAWNGIQVITVELYPASKRATAFGFLNAMCKLAAILGS 646

  Fly   467 LTPLITLLDSF--DPKIPAVLFGVVALIS-GFWVMFLPET 503
                 ::..||  ..|:..:|....||:| |...:.||||
Zfish   647 -----SIFASFIGITKVIPILLSFAALVSGGVLALKLPET 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6126NP_650528.1 2A0119 15..510 CDD:273328 135/676 (20%)
MFS 130..501 CDD:119392 114/557 (20%)
sv2bbXP_005161575.1 MFS 115..>308 CDD:119392 63/278 (23%)
Pentapeptide_4 457..532 CDD:290330 2/74 (3%)
MFS 538..>676 CDD:119392 37/148 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.