DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8925 and CG12783

DIOPT Version :10

Sequence 1:NP_650526.1 Gene:CG8925 / 41963 FlyBaseID:FBgn0038404 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001262644.2 Gene:CG12783 / 42019 FlyBaseID:FBgn0038448 Length:493 Species:Drosophila melanogaster


Alignment Length:420 Identity:89/420 - (21%)
Similarity:157/420 - (37%) Gaps:99/420 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 ILSLVETCFLVGAAAGAVLSGWISDRFGRRHTLMAFVTIQSV----------FGG--ILAFSTSV 328
            :.||....|: |....:...|:|:|:.|||.||:..:||.::          |.|  ::.|.|.:
  Fly    56 LASLTAAGFM-GIICSSYFWGYITDKKGRRWTLLRTITISNLCSLASMFTVTFTGFFVMRFITCI 119

  Fly   329 AM----FMSLRVIIGFASMTVTVVS------FVLVVELVSGKWRTVIGILNILPVAISYVLSAGL 383
            .:    |::...:..|.|..:.|.|      |.....:....|.|:.             ||:||
  Fly   120 FVAGPSFVAATYLSEFCSHRIMVRSITHLYMFTGFAMISCPAWATLF-------------LSSGL 171

  Fly   384 ---------AYLIRDWRHLQLAISWPWLIMLSIWFWLPESPRWLLAQGRLDELCGLIERAARMNG 439
                     :..:|.||.|......|.::...:...|||||::||..|........:|..:|.| 
  Fly   172 IEFEEKLVGSLTLRPWRVLGCLYILPGVVAFLLLLLLPESPKFLLMIGETKRGLDTMEWISRKN- 235

  Fly   440 TSASLPSNYRKTLEAAVPRAVQSPPEATTSVESKAVEADAPDPSASGHVNPLLVVFSAKYWRTTC 504
            |..:|..:..|.| .|....||...........:::..||         .||:......|:  ||
  Fly   236 TGRTLSEDQMKRL-LAYQEHVQVKRRKEHQNFFRSMLDDA---------MPLVRKPYGGYF--TC 288

  Fly   505 LTLVIWLTLIIIYFGLTLHLSNLGGNIYINSAVAGTVEAISICISILVV------------LKVG 557
            :.:|::: |.::..||.:..:.:.....:..   |....::.| .:|.|            |.|.
  Fly   289 VCMVMFV-LGLLTHGLGIWYTAMRNRCNMRQ---GNTNGMTFC-QVLFVPETGPFIETESDLDVV 348

  Fly   558 IRRSLIG----------YMLLPGLCCLATNLVSNQT----GVIALATIAKCLIGANNAIIPTYT- 607
            ...|..|          |::|..:...:...|..:.    .::|.:|....||.|.|.::..:: 
  Fly   349 CSDSFKGFNDSFVLGFVYVVLYNISWASLFCVHKKVMFVFSLVASSTFGFLLIFATNHMLQLFSL 413

  Fly   608 --AMQYPTIVRNFGVGMGNLASGIALILVP 635
              .:.:|.|:    :|   |..|..|:.||
  Fly   414 VFLIAFPGII----IG---LLGGSLLVFVP 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8925NP_650526.1 MFS_SLC22 249..666 CDD:340875 89/420 (21%)
CG12783NP_001262644.2 synapt_SV2 <2..>310 CDD:130366 64/281 (23%)

Return to query results.
Submit another query.