DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8925 and Slc22a20

DIOPT Version :10

Sequence 1:NP_650526.1 Gene:CG8925 / 41963 FlyBaseID:FBgn0038404 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001381833.1 Gene:Slc22a20 / 293686 RGDID:1311460 Length:556 Species:Rattus norvegicus


Alignment Length:526 Identity:139/526 - (26%)
Similarity:242/526 - (46%) Gaps:35/526 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 TKLLERLLGCLTPWQSMWCALLSIFQAICTFHIFVYVFQIAPKDFWCARPENLMQMSVSE---W- 207
            |.||: .||.:..:|.::.|||.:...:...|.|:..|..|.....|..|.|..:.:.::   | 
  Rat     4 TDLLD-ALGGVGRFQLVYTALLLLPCGLLACHTFLQNFTAAAPPHHCQHPANYTEATTNDSGAWL 67

  Fly   208 -RNISQSSNGCLLLDVDYTQVTYENNQLINWPENATDLGYRQCWHFEFSDVDGSAKTLVQEFDLV 271
             ..|..:.:|.......||:..:...:...........|.:..|.::.|..   ..|:|.|:|||
  Rat    68 RATIPLNQHGVPEPCQRYTEPQWALLEPNTSSHGVATEGCKDGWVYDRSIF---PSTIVMEWDLV 129

  Fly   272 C-GRDILSLVETCFLVGAAAGAVLSGWISDRFGRRHTLMAFVTIQSVFGGILAFSTSVAMFMSLR 335
            | .|.:..|.::.::.|...||.|.|.::||.||:..|:......:|.|.:.|:..|.:.:...|
  Rat   130 CEARTLRDLAQSIYMSGVLVGAALFGSLADRLGRKAPLVWSYLQLAVSGAVTAYVGSFSAYCIFR 194

  Fly   336 VIIGFASMTVTVVSFVLVVELVSGKWRTVIGILNILPVAISYVLSAGLAYLIRDWRHLQLAISWP 400
            .::|.....:.:.|..||||.:..:.|||.|||......:..::.||:|||||.||.||.|:|.|
  Rat   195 FLMGMTFSGIILNSLSLVVEWMPTRGRTVAGILLGFSFTLGQLILAGVAYLIRPWRWLQFAVSAP 259

  Fly   401 WLIMLSIWFWLPESPRWLLAQGRLDELCGLIERAARMNGTSASLPSNYRKTLEAAVPRAVQSPPE 465
            :|:.....:|||||.||||..|:..:....:.:.|.|||..|   ...|.|:|            
  Rat   260 FLVFFLYSWWLPESSRWLLLHGKAQQAVQNLRKVAMMNGRKA---EGERLTIE------------ 309

  Fly   466 ATTSVESKAVEADAPDPSASGHVNPLLVVFSAKYWR-TTCLTLVIWLTLIIIYFGLTLHLSNLGG 529
                |.|..::.:......|   |.:|.:|.....| .||..:::|.:..:.|:||.:.|...|.
  Rat   310 ----VVSSYIQNEFASVRTS---NSILDLFRTPGIRKVTCCLMMVWFSNSVAYYGLAMDLQKFGL 367

  Fly   530 NIYINSAVAGTVEAISICISILVVLKVGIRRSLIGYMLLPGLCCLATNLVSN--QTGVIALATIA 592
            :||:..|:.|.::..::.::...::.||.|.::..:::|.||..:|...|..  ||.....|.:.
  Rat   368 SIYLVQALFGIIDIPAMLVATTTMIYVGRRATVSSFLVLAGLMVIANMFVPEDLQTLRTVQAALG 432

  Fly   593 KCLIGANNAIIPTYTAMQYPTIVRNFGVGMGNLASGIALILVPFLWKLEHIDPLLPLNVMGVCGL 657
            |..:.::...:..:|...|||.:|..|:|..::.:.:..:..|.:..|..|.|:||....|...:
  Rat   433 KGCLASSFICVYLFTGELYPTEIRQMGMGFASVNARLGGLAAPLITTLGEISPVLPPVSFGATSV 497

  Fly   658 IGAVAI 663
            :..:|:
  Rat   498 LAGMAV 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8925NP_650526.1 MFS_SLC22 249..666 CDD:340875 117/419 (28%)
Slc22a20NP_001381833.1 MFS_SLC22A6_OAT1_like 103..508 CDD:341004 118/426 (28%)

Return to query results.
Submit another query.