DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and SV2B

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_055663.1 Gene:SV2B / 9899 HGNCID:16874 Length:683 Species:Homo sapiens


Alignment Length:549 Identity:104/549 - (18%)
Similarity:174/549 - (31%) Gaps:186/549 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 VCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTL 272
            :|.....|.:..|...||:..|..|.|.|:||.|||.:|.:|..:...|.........:..:|..
Human   140 MCLSSSKKGMLGMIVYLGMMAGAFILGGLADKLGRKRVLSMSLAVNASFASLSSFVQGYGAFLFC 204

  Fly   273 RALLGL-----VSVSVTYSGLILAIEYVDGKWRTIAGMY----NLFPLPISYMII--------SG 320
            |.:.|:     :.:...|....|:.| ..|:..:..|::    .|:...:::.||        .|
Human   205 RLISGIGIGGALPIVFAYFSEFLSRE-KRGEHLSWLGIFWMTGGLYASAMAWSIIPHYGWGFSMG 268

  Fly   321 LAYLTQDYQRLQLCIGIPGIFLCFLWFV----VPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLP 381
            ..|....::...:...:|    |.:..|    :|||||:||..|:.||...|::.....|.|...
Human   269 TNYHFHSWRVFVIVCALP----CTVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKG 329

  Fly   382 ADYQL-------TPPTQES--STQDVTYLFRSSYLRRISICF--------FC------------- 416
            ...::       ||...:.  ..|..|..:...:|.|....|        :|             
Human   330 TPEKVFTVSNIKTPKQMDEFIEIQSSTGTWYQRWLVRFKTIFKQVWDNALYCVMGPYRMNTLILA 394

  Fly   417 -IWFTMNLVYYGIIL----------------NMSSFGGN-------------------------- 438
             :||.|...|||:.:                .|..|.|.                          
Human   395 VVWFAMAFSYYGLTVWFPDMIRYFQDEEYKSKMKVFFGEHVYGATINFTMENQIHQHGKLVNDKF 459

  Fly   439 ----------------------------------------------------------------- 438
                                                                             
Human   460 TRMYFKHVLFEDTFFDECYFEDVTSTDTYFKNCTIESTIFYNTDLYEHKFINCRFINSTFLEQKE 524

  Fly   439 -------------VYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGH 490
                         :||.|.|..|..:|...::..::.::|:..:...:::.:.|  ||..:..|:
Human   525 GCHMDLEQDNDFLIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAV--CCFFLFFGN 587

  Fly   491 ADLLWLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALIL--TPYLSLLN 553
            ::...:....|..|. :|:|.|. :.|.|.|||||..|....|..|.......||  |.:.|.:.
Human   588 SESAMIGWQCLFCGT-SIAAWNA-LDVITVELYPTNQRATAFGILNGLCKFGAILGNTIFASFVG 650

  Fly   554 KIEGHLLMTLLTAWSIF-GGFVVLFLPET 581
            ..:  ::..||.|.|:. ||.:.|.||||
Human   651 ITK--VVPILLAAASLVGGGLIALRLPET 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 100/545 (18%)
SV2BNP_055663.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
synapt_SV2 8..683 CDD:130366 104/549 (19%)
Blue background indicates that the domain is not in the aligned region.

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