DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and nanT

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_417691.4 Gene:nanT / 947740 ECOCYCID:G436 Length:496 Species:Escherichia coli


Alignment Length:441 Identity:87/441 - (19%)
Similarity:137/441 - (31%) Gaps:153/441 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 GGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTL---RALLGLVSVSVTYSGLIL 290
            ||::.|.:.|::||:..:..|.||   |......|.....|:|:   |.::|: .::..|..   
E. coli    71 GGLMLGAMGDRYGRRLAMVTSIVL---FSAGTLACGFAPGYITMFIARLVIGM-GMAGEYGS--- 128

  Fly   291 AIEYVDGKW----RTIAGMYNLFPLPISYMIISGLA----YLTQDYQ--------RLQLCIGI-P 338
            :..||...|    |..|          |..:|||.:    ...|.|.        |....||| |
E. coli   129 SATYVIESWPKHLRNKA----------SGFLISGFSVGAVVAAQVYSLVVPVWGWRALFFIGILP 183

  Fly   339 GIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPTQESSTQDVTYLFR 403
            .||..:|...:||:..|.........||.:::..  :.|....|:..:|                
E. coli   184 IIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDIL--YRGEHRIANIVMT---------------- 230

  Fly   404 SSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAVAM-YIITKVGKK 467
               |...:..:||                  |.||:. |:|:..::.:...|:.: :::...||:
E. coli   231 ---LAAATALWFC------------------FAGNLQ-NAAIVAVLGLLCAAIFISFMVQSAGKR 273

  Fly   468 W-----LFCATLIC------------------------------------AGVACCCAAITEGHA 491
            |     |....|..                                    |.|.||.....   .
E. coli   274 WPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFL---G 335

  Fly   492 DLLWLKITF---------LMMGKFTISAGNT-------------------IMPVYTAELYPTPIR 528
            |.|..:..:         |::..|.|...|.                   |:|......:.|..|
E. coli   336 DWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIGGYFDTDQR 400

  Fly   529 NVGVGACNVAAGLALILTPYLSLLNKIEGHL-LMTLLTAWSIFGGFVVLFL 578
            ..|:|.......|...|.|.:..|  |...| |.|.|.:.|....|||:.|
E. coli   401 AAGLGFTYNVGALGGALAPIIGAL--IAQRLDLGTALASLSFSLTFVVILL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 87/441 (20%)
nanTNP_417691.4 PRK03893 1..496 CDD:179668 87/441 (20%)

Return to query results.
Submit another query.