DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and ydjK

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_416289.1 Gene:ydjK / 946293 ECOCYCID:G6962 Length:459 Species:Escherichia coli


Alignment Length:404 Identity:99/404 - (24%)
Similarity:152/404 - (37%) Gaps:100/404 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 GVATGGIISGYLSDKFGRKT------MLFISAVLQTIF--GLWLYICSSFELYLTLRALLGLVSV 281
            |:..|.::.|.:.||.||:.      .:.|::::...|  .:...|...|.:.:.|.|||..:..
E. coli    70 GMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFVMGVGLGALLVTLFA 134

  Fly   282 SVTYSGLILAIEYVDGK----WRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIF- 341
            ..|        ||:.|:    |.:.......:..|:..:|..||..|.......::.:.||.|. 
E. coli   135 GFT--------EYMPGRNRGTWSSRVSFIGNWSYPLCSLIAMGLTPLISAEWNWRVQLLIPAILS 191

  Fly   342 ---LCFLWFVVPESPRWLLVKGRIDE----VRRIIEAAAKFNGRQLP----ADYQLTPPTQESST 395
               ....|...|||||||..:||..|    :|.|.|...:..|:.||    ||....|       
E. coli   192 LIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPVVIADDGKAP------- 249

  Fly   396 QDVTY--LFRSSYLRRISICFFCIWFTMNLVYY-------------------GIILN-MSSFGGN 438
            |.|.|  |.....|:|: |...|:...||:|.|                   .|:|| ||.||..
E. coli   250 QAVPYSALLTGVLLKRV-ILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAP 313

  Fly   439 VYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLL------WLK 497
            .             .|.:||.::.|:.:|.:....||...|   ...|......:|      :..
E. coli   314 F-------------GIFIAMLVMDKIPRKTMGVGLLILIAV---LGYIYSLQTSMLLITLIGFFL 362

  Fly   498 ITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMT 562
            |||:.|.....||      ||..|::||..:..|.|..|....::.|..||          .:..
E. coli   363 ITFVYMYVCYASA------VYVPEIWPTEAKLRGSGLANAVGRISGIAAPY----------AVAV 411

  Fly   563 LLTAWSIFGGFVVL 576
            ||:::.:.|.|::|
E. coli   412 LLSSYGVTGVFILL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 99/404 (25%)
ydjKNP_416289.1 MFS_SV2_like 25..426 CDD:340874 99/404 (25%)

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