DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and ydjE

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_416283.1 Gene:ydjE / 946274 ECOCYCID:EG12369 Length:452 Species:Escherichia coli


Alignment Length:430 Identity:105/430 - (24%)
Similarity:165/430 - (38%) Gaps:96/430 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 VGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLY 261
            |.|.|::.:        |........:.|...|.:..|::.|.|||:....|:.::..|......
E. coli    49 VSNGWSNNF--------LNAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAATGAA 105

  Fly   262 ICSSFELYLTLRALLGLVSVSVTYSGLILAIEY----------VDGKWRT-IAGMYNLFPL---P 312
            ........:..|.|:|      |..|.::.:.|          |.|||.. ::.:.|..|:   .
E. coli   106 FVPDMYWLIFFRFLMG------TGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPMLSAA 164

  Fly   313 ISYMIISGLAYLTQDYQRLQLCIGIPGIFLCFLWFV----VPESPRWLLVKGRID----EVRRII 369
            |..::|:..::      |:...:|  ||.:...||:    ..||||||..||:|.    ::|.:.
E. coli   165 IGVVVIAFFSW------RIMFLLG--GIGILLAWFLSGKYFIESPRWLAGKGQIAGAECQLREVE 221

  Fly   370 EAAAKFNGRQLPADYQLTPPTQESSTQDV-----TY--LFRSSYLRR------------ISICFF 415
            :...:....:||      |.|...|...|     |:  ||:...|||            ||:...
E. coli   222 QQIEREKSIRLP------PLTSYQSNSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNISLYTI 280

  Fly   416 CIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATL--ICAG 478
            .:|.....|..||.::.|.....|.:..|..|      |.:|..||....:: ||.:||  |.|.
E. coli   281 TVWIPTIFVNSGIDVDKSILMTAVIMIGAPVG------IFIAALIIDHFPRR-LFGSTLLIIIAV 338

  Fly   479 VACCCAAITEGHADLLW--LKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGL 541
            :....:..|...|.|::  :.|.||.|.....||      ||..||:||.:|..|.|..|....:
E. coli   339 LGYIYSIQTTEWAILIYGLVMIFFLYMYVCFASA------VYIPELWPTHLRLRGSGFVNAVGRI 397

  Fly   542 ALILTPY--LSLLN--------KIEGHLLMTLLTAWSIFG 571
            ..:.|||  .:||.        .:.|.:|:......||||
E. coli   398 VAVFTPYGVAALLTHYGSITVFMVLGVMLLLCALVLSIFG 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 105/430 (24%)
ydjENP_416283.1 MFS_SV2_like 24..435 CDD:340874 101/426 (24%)

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