DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and ynfM

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_416113.1 Gene:ynfM / 946138 ECOCYCID:G6854 Length:417 Species:Escherichia coli


Alignment Length:396 Identity:89/396 - (22%)
Similarity:145/396 - (36%) Gaps:121/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 VATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGL-----VSVSVTY 285
            :|.|.:.:|.|||..|||.::..:.:|.:|..|...:.:|:...|.:|||:||     .:|.:||
E. coli    84 LAIGLLFTGPLSDAIGRKPVMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTY 148

  Fly   286 -------------SGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGI 337
                         .||     |:.|  .:|.||        |..:|||   :..|:...::.:..
E. coli   149 LSEEIHPSFVAFSMGL-----YISG--NSIGGM--------SGRLISG---VFTDFFNWRIALAA 195

  Fly   338 PGIF-----LCFLWFVVPES---------PRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTP 388
            .|.|     |.| |.::|||         |:.|.:..|:           .:..|.||       
E. coli   196 IGCFALASALMF-WKILPESRHFRPTSLRPKTLFINFRL-----------HWRDRGLP------- 241

  Fly   389 PTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPA 453
                       .||...:|...|       |.....|.|..|.:|.:    :::.|:.||:.:..
E. coli   242 -----------LLFAEGFLLMGS-------FVTLFNYIGYRLMLSPW----HVSQAVVGLLSLAY 284

  Fly   454 IA------VAMYIITKVGK--KWLFCATLICAGVACCCAAITEGHADLLWLKITFLMMGKFTISA 510
            :.      .|..:.|:.|:  ..||...::..|:.....:       .|||    :..|....||
E. coli   285 LTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGLLMTLFS-------SLWL----IFAGMLLFSA 338

  Fly   511 G-NTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHL--LMTLLTAWSIFGG 572
            | .....|.::.:.|...|..|..:       :|.|..|. |.:.|.|.|  :......|:..|.
E. coli   339 GFFAAHSVASSWIGPRAKRAKGQAS-------SLYLFSYY-LGSSIAGTLGGVFWHNYGWNGVGA 395

  Fly   573 FVVLFL 578
            |:.|.|
E. coli   396 FIALML 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 89/396 (22%)
ynfMNP_416113.1 MFS_NepI_like 38..409 CDD:340882 89/396 (22%)

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