DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and yaaU

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_414587.1 Gene:yaaU / 944766 ECOCYCID:EG11566 Length:443 Species:Escherichia coli


Alignment Length:426 Identity:105/426 - (24%)
Similarity:166/426 - (38%) Gaps:81/426 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LKNVAEMFFLLGVAT------GGIISGYLSDKFGRKTMLFISAV-LQTIFGLWLYICSSFELYLT 271
            ||..|:...|||..|      |..:.||:|||.||:.|..|..: :..|....:::.|..|| |.
E. coli    48 LKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVEL-LV 111

  Fly   272 LRALLGLV---------SVSVTYS---------GLILAIEYVDGKWRTIAGMYNLFPLPISYMII 318
            :|.|:|:|         |:...:|         ..|.|:.||......:.| |.|:.:...:..:
E. coli   112 MRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVG-YWLYDVEGGWRWM 175

  Fly   319 SGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPAD 383
            .|.|             .||.:.:....|.:||||||||.|||:.|..   |...|..|..:..|
E. coli   176 LGSA-------------AIPCLLILIGRFELPESPRWLLRKGRVKECE---EMMIKLFGEPVAFD 224

  Fly   384 YQLTPPTQESSTQDVTYLFRSSYLRR-------ISICFFCIWFTMNLVY-YG---IILNMSSFGG 437
            .:....|:          ||..:.||       ::..:.|....|..:| :|   :.|.....|.
E. coli   225 EEQPQQTR----------FRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGK 279

  Fly   438 NVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADL-LWLKI-TF 500
            |..|.:.:..|..:......|..:...|::.|...:.....:|.....:.   .|: :||.: .|
E. coli   280 NAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLI---PDMGIWLVVMAF 341

  Fly   501 LMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYL--SLLNKIEGHLLMTL 563
            .:...|:...|| :..:|..||:||.||...||.....:.:..|::.:.  ..:|.......|.:
E. coli   342 AVYAFFSGGPGN-LQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLM 405

  Fly   564 LTAWSIFGGFV-VLFLPETAVRQKTDNQGGSSANAS 598
            ....|:||..: |.|.|||        :|.|.|..|
E. coli   406 GAGISLFGLLISVAFAPET--------RGMSLAQTS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 98/405 (24%)
yaaUNP_414587.1 MFS_SV2_like 20..418 CDD:340874 96/401 (24%)

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