DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and TPO1

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_013072.1 Gene:TPO1 / 850631 SGDID:S000003951 Length:586 Species:Saccharomyces cerevisiae


Alignment Length:526 Identity:119/526 - (22%)
Similarity:193/526 - (36%) Gaps:168/526 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LSGSVDNCRRWEGIDWSQVS-------------------------NETTLPSDWKTPAEMDKK-- 182
            |:|||:...|.| :|::..:                         |:...|.:|    .|.||  
Yeast    88 LTGSVNEPDRVE-VDYTNCAPMGGDRPYPPSLPSRDLYEVTFDGPNDPLHPFNW----PMKKKVL 147

  Fly   183 --LVACEKWEYETNDNV-----GNTWTSQWDLVCEKEHLKNVAEM----FFLLGVATGGIISGYL 236
              ||.|       .|::     .:.:.|....:||..|:..|..:    .|:||.|...:|...|
Yeast   148 LCLVLC-------LDSIAIAMCSSIFASAVPQICEIYHVIEVVAILGITLFVLGFAASPVIYAPL 205

  Fly   237 SDKFGRKTMLFISAV--------------LQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSG 287
            |:.:|||.:|.:||.              |||||     ||..|      ...:|...::|..:.
Yeast   206 SELYGRKGVLVLSAFGFALFQFAVATAENLQTIF-----ICRFF------GGFIGAAPMAVVPAA 259

  Fly   288 LILAIE-YVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQ--DYQRLQLCIGIPGIFLCF----- 344
            .....: .|.||...:..: .:|..||...::.  :|:.|  .::.|:..:|      ||     
Yeast   260 FADMFDTNVRGKAIALFSL-GVFVGPILSPVMG--SYIAQRTTWRWLEYVVG------CFASAVF 315

  Fly   345 ----LWFVVPESPRWLLVKGRIDEVRRI-----IEAAAKFNGRQLPADYQLTPPTQESSTQDVTY 400
                |:|.....|..|:.|.:  ::|:.     |.||.:      ..:..:....|::.|:.:..
Yeast   316 VAIVLFFEETHHPTILVNKAK--QMRKQSNNWGIHAAHE------DVELSIKDIVQKTVTRPIIM 372

  Fly   401 LFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVE-IPAIAVAMYIITKV 464
            ||....|..::|        .|...|||:          ||      |:| .|.:.|..|..|:.
Yeast   373 LFVEPLLLFVTI--------YNSFVYGIL----------YL------LLEAYPLVFVEGYGFTEN 413

  Fly   465 GKKWLFCATLICAGVACCCAAITEGHADLLWLKITFLMMGK-------FTISAGNTIMPV----- 517
            | :..:.|.:|  |:..|.|.|  .:.|..:|| .....||       :.:....|:.|:     
Yeast   414 G-ELPYIALII--GMMVCAAFI--WYMDNDYLK-RCRAKGKLVPEARLYAMVIAGTVFPIGILWF 472

  Fly   518 -YTAELYPTPIRNV--GVGACNVAAGLALILTPYLSLLNKIEGHLLM--------TLLTAWSIFG 571
             :|. .||..|..:  .||...:..||..|..|.|:.:  ||.:||:        |.:.  |.||
Yeast   473 CWTG-YYPHKIHWMVPTVGGAFIGFGLMGIFLPCLNYI--IESYLLLAASAVAANTFMR--SAFG 532

  Fly   572 GFVVLF 577
            ....||
Yeast   533 ACFPLF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 103/453 (23%)
TPO1NP_013072.1 MFS_Tpo1_MDR_like 156..577 CDD:340881 102/446 (23%)

Return to query results.
Submit another query.