DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and slc22a21

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001295487.1 Gene:slc22a21 / 799908 ZFINID:ZDB-GENE-091118-62 Length:546 Species:Danio rerio


Alignment Length:525 Identity:160/525 - (30%)
Similarity:258/525 - (49%) Gaps:36/525 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 DDEDETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVAT 141
            |.|::|    ..:|.:|.:|..:..||.|..:||.|...|.::........|:.|..|.  ..|.
Zfish     5 DYEEQT----AFLGAWGPFQKTVFSLLCLSIIPNGFTGLSIVFLGDTPAHHCRIPETLN--LTAG 63

  Fly   142 WRNLS---------GSVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNV 197
            |||.|         .....|.|.........|:...||......:|:.::..| :.|.|: .:..
Zfish    64 WRNASVPRPQPHGDPRASRCYRLRLDLVKNYSDGGLLPGLDVNVSEIPREECA-DGWIYD-KEIY 126

  Fly   198 GNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYI 262
            .:|..|:|||||..:....:....|..||.||.:|||.:||:||||.:||::..:||:|.:....
Zfish   127 SSTIVSEWDLVCSDDWKSPLTSSIFFCGVLTGSVISGPVSDRFGRKIVLFVTMAIQTLFTVVQVF 191

  Fly   263 CSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYN--LFPLPISYMIISGLAYLT 325
            ..|::::..|..::|:..:|...:..:|.:|.:....|.:.....  || ..|.|||:...|:..
Zfish   192 SPSWQIFCFLFFIVGMGQISNYVAAFVLGMEILSSSVRDVYSTLGVCLF-FSIGYMILPLAAFFL 255

  Fly   326 QDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPT 390
            :|::.|.|.:.|||.|...||:.:||||||||.:||:.|...||..|||.|  ::.|...:.|..
Zfish   256 RDWRSLMLALTIPGFFYIPLWWFIPESPRWLLSQGRVQEAEAIIRKAAKIN--RVTAPDVIFPLM 318

  Fly   391 QESSTQD--------VTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAG 447
            |  ||:|        |..|.:||.:|.::.....||..:::.|..:.||.||..||:|||..|:.
Zfish   319 Q--STEDAGGVQSFSVCELLKSSNIRYMTGLLCLIWMAVSIGYCALSLNTSSLHGNIYLNCLLSA 381

  Fly   448 LVEIPAIAVAMYIITKVGKKWLFCATLICAG-VACCCAAITEGHADLLWLKITFLMMGKFTISAG 511
            :||:||:.:|..::....::....:||...| |......|.|..:.   :.:..:|:|||.:||.
Zfish   382 VVEVPALLMAWLMLRLAPRRHCLASTLALGGLVLLLILLIPEDQSS---VTLALVMLGKFGLSAA 443

  Fly   512 NTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVL 576
            .:|:...|||||||.:||..:|||::::.:..|..||.:.|......|...|:...::..|.:..
Zfish   444 FSIIYPVTAELYPTVLRNTALGACSMSSRVGGISAPYFNYLGSYHRSLPYILIGGINVLSGLLSF 508

  Fly   577 FLPET 581
            .|||:
Zfish   509 LLPES 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 156/510 (31%)
MFS 222..579 CDD:119392 120/367 (33%)
slc22a21NP_001295487.1 2A0119 14..521 CDD:273328 157/512 (31%)
MFS 146..511 CDD:119392 120/372 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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