DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Slc22a16

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001419271.1 Gene:Slc22a16 / 682934 RGDID:1592810 Length:852 Species:Rattus norvegicus


Alignment Length:570 Identity:132/570 - (23%)
Similarity:244/570 - (42%) Gaps:93/570 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRNLSG 147
            ::|.|.:||:|::|:.:.::.:...:....|..||::.:...:..|:.|..::.   |.:||:|.
  Rat     7 ELIFDHVGHFGRFQIALYLICAYQSISCGIHFLSSVFMSIIPEHACKPPGTVRK---AVFRNVSA 68

  Fly   148 SVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVAC---EKWEY--------ETNDNVGNTW 201
                   |...|...:          ::|...|..:|..   |.||.        |...::|..:
  Rat    69 -------WRLEDILAL----------RSPEHKDHIMVELHDGEIWELTRCSRTWRENTSHLGYEY 116

  Fly   202 T----------------SQW--------DLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGR 242
            :                |:|        :|||:::...|:.:..|:..:..|.|...||||:|||
  Rat   117 SGYKRDSPCSDGYIYDQSKWRSSVVGSFNLVCDQKWYANMIQPLFIFAMLLGAITFSYLSDRFGR 181

  Fly   243 KTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMY- 306
            :..|:.:.:....||:.......:..::..|..|.:.|........:..:|::..:.||.|.|: 
  Rat   182 RVALWCTTIGVFFFGIGSIFIFDYFSFMAARFFLVMTSSGYFVVVFVYVMEFIGRESRTWASMHL 246

  Fly   307 NLFPLPISYMIISGLAYLTQD---YQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRI 368
            |.| ..|..|:::.::||.:.   ||.:...:..|.|..|::   :||:|.|||.:||..|.:.:
  Rat   247 NTF-FAIGTMLVALVSYLVKTWWLYQIILWTVTAPFILCCWM---LPETPFWLLSEGRYKEAQGV 307

  Fly   369 IEAAAKFNGRQLPADYQLTPPTQESSTQDVTY----------------LFRSSYLRRISICFFCI 417
            ::|.|.:| :....|      ..|..:.|||.                |||:..:.::::..:..
  Rat   308 VDAMAVWN-KSSSCD------LIELLSLDVTRSHDKSHKGAGKPSLGDLFRNPDIAKMTLIVWLD 365

  Fly   418 WFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACC 482
            |||:||.||...:.......:.:|...|.|.|||||.......:.:||::......|:.:...|.
  Rat   366 WFTVNLGYYVFAMEAVRRKEHEHLYYLLVGAVEIPAYVFLCIWMQRVGRRKTMLTFLLMSSFICV 430

  Fly   483 CAAITEGHADLL-WLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILT 546
            ...:....:|.. ..|....:..|..:.:....:.:||||||||.:|.:.||:.|:.:.:|.::.
  Rat   431 VYVVIPSDSDTAKEAKGAVALFVKVAVGSVFAFIYLYTAELYPTIMRCLAVGSSNMVSHVASMVI 495

  Fly   547 PYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFLPETAVR------QKTDNQ 590
            |.....:|:...|...|....:|..|.:.|.||||..|      :.|:.|
  Rat   496 PLSQHFSKVWIFLPQILFGTLAILSGLLSLNLPETQNRPMISTWETTEEQ 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 104/442 (24%)
Slc22a16NP_001419271.1 MFS 118..528 CDD:475125 100/420 (24%)
PHA03169 645..>852 CDD:223003
Blue background indicates that the domain is not in the aligned region.

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