DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and SLC22A3

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_068812.1 Gene:SLC22A3 / 6581 HGNCID:10967 Length:556 Species:Homo sapiens


Alignment Length:532 Identity:144/532 - (27%)
Similarity:252/532 - (47%) Gaps:61/532 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKD-FWCQRPA------QLQHMPVATWRNLS 146
            :|.:|::|..:.:||.|..|...|.....::.....| :||:.|:      :....|...|...:
Human    11 VGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTA 75

  Fly   147 GSV---------DNCRRWEGIDWSQVSNETTLPSDWKTPAE-------MDKKLVACE-KWEYETN 194
            .:.         ..|:|:    ..:.:|::...:...:.|:       ....||.|. .|.|.  
Human    76 PASRGPEPPERRGRCQRY----LLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYA-- 134

  Fly   195 DNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLW 259
             ...:|..|::||||....:.::.:....||..||....||.:|::||..:..:|.:...:.|:.
Human   135 -QAHSTIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVV 198

  Fly   260 LYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYL 324
            :....:|.:::..|.|.|:.......:..::..|.|..|.|.|.|:.......:..:|:.|:||.
Human   199 VAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYF 263

  Fly   325 TQDYQRLQLCIGIPG-IFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADY-QLT 387
            ..::|.:||.|.:|. :||.:.| |||||||||:.:.:.|:..:|:...||.||:.|.::| ::|
Human   264 IPNWQGIQLAITLPSFLFLLYYW-VVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYSEIT 327

  Fly   388 PPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIP 452
            ...:|.|......|.|:..:|:.::.....|||..:||.|:::.:...|||:|::..::|:||:|
Human   328 VTDEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIGGNLYIDFFISGVVELP 392

  Fly   453 AIAVAMYIITKVGKKWLFCATLICAGVACCCAA-ITEGHADLLWLKITFLMMGKFTISAGNTIMP 516
            ...:.:..|.::|::..|.|:.|.|||||...| :.||   :.||:.|...:|:..|:....|:.
Human   393 GALLILLTIERLGRRLPFAASNIVAGVACLVTAFLPEG---IAWLRTTVATLGRLGITMAFEIVY 454

  Fly   517 VYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAW------------SI 569
            :..:|||||.:||.||..|:.......|:.|:          ||..|...|            ||
Human   455 LVNSELYPTTLRNFGVSLCSGLCDFGGIIAPF----------LLFRLAAVWLELPLIIFGILASI 509

  Fly   570 FGGFVVLFLPET 581
            .||.|:| ||||
Human   510 CGGLVML-LPET 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 142/529 (27%)
MFS 222..579 CDD:119392 111/371 (30%)
SLC22A3NP_068812.1 2A0119 12..528 CDD:273328 144/531 (27%)
MFS 149..518 CDD:119392 111/383 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.